| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_3327 |
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| Symbol | |
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| ID | 6163714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 3703783 |
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| End bp | 3704619 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641666102 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001792350 |
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| Protein GI | 171060001 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGC GTCCGCTCTG GGGCAGCGTT GTCCTCTACC TGCTGGCCGC GCTGGTGGTC
ATCGCGTCGG TCTATCCCTT CATCTACACG GTGGCCACGT CGCTCAAGAG CGGCACGGCG
CTGTTCAGCT CTAACCTGAT TCCGGACGCG CCGACGTTTC GCAACTACGT GCAGCTGTTC
GAGGGCCGCC AGCCCTTCGG CCGACAGTTG GCCAACTCGG TGCTGGTCGC CACCGTCACG
GTGGTGATCT CGATGCTGAT GGCGATCACT GCGGCCTATG CGCTGGGCCG CATCCAGTTC
AAGGGCAAGG GCGCGCTGCT GCTGGCGATC CTGGCGGTGT CGATGTTCCC GCAGGTGGCG
GTGCTGTCGG GCATGTTCGA GCTGATGCAG GCGCTCGGCC TGTACAACCG CTCGATCGGC
CTGGTGGTGC CCTACACGCT GTTCACGCTG CCGTTCACGG TCTGGATCCT GACCACCTTC
ATGCGCGGCT TGCCCAAGGA GCTCGAAGAG GCCGCCATCA TGGACGGCTG CGGCCCGCTG
CGCATCATCT TCGAGGTCTT CATGCCGCTG CTCGCGCCGG CGCTGGTCTC GACCGGGCTG
CTGGCCTTCA TCGGCGCCTG GAACGAGTTC CTGTTCGCGC TGACCTTCGT CTCCGACGAC
ACCCAGCGCA CCGTGCCGGT CGGCATCTCG CTGATCACCG GCGCCACCGC GTACGAGGTG
CCGTGGGGCA GCATCATGGC CGCGTCGGTC ATCGTCACCG TGCCGCTGGT GGTGCTGGTG
CTGATCTTCC AGAAGAAGAT CGTCTCCGGC CTGACCGCTG GCGCGATCAA GGGCTGA
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| Protein sequence | MNQRPLWGSV VLYLLAALVV IASVYPFIYT VATSLKSGTA LFSSNLIPDA PTFRNYVQLF
EGRQPFGRQL ANSVLVATVT VVISMLMAIT AAYALGRIQF KGKGALLLAI LAVSMFPQVA
VLSGMFELMQ ALGLYNRSIG LVVPYTLFTL PFTVWILTTF MRGLPKELEE AAIMDGCGPL
RIIFEVFMPL LAPALVSTGL LAFIGAWNEF LFALTFVSDD TQRTVPVGIS LITGATAYEV
PWGSIMAASV IVTVPLVVLV LIFQKKIVSG LTAGAIKG
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