Gene Smed_2697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_2697 
Symbol 
ID5323566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp2804060 
End bp2804941 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content62% 
IMG OID640791641 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001328362 
Protein GI150397895 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAGA GCGCTCTCGC CCGCACGCTG CGCACCATTG CCGGTTGGCT CGTCGTCGGG 
GCATTCTTTT TCCCGATCTA CTTCTGGACC TCGGTCGCCT TCCGCGACGC CAAGGACATT
TTCAACTGGC CGCCGATCTT CTTCAATTTC CAGCCGACGG TGAGGAATTT CGAGCAGGTC
TTCGGCATCT CGCTGGGCTT CGGTTACGGC AGCCAGGAAG CCGTGACGCC CGGCGGCGGC
AACTTCTACA TGGGGCCGCG CCTTTGGGAC TCGATCGTCG TCGCATCTTT GTCGACGGTG
CTGGCGATCG TGGTTGCGAC GCTTGCTTCC TATGCTTTGT CGCGCATGCA TTTCCGCGGC
CGCCATGAAT TCGTCAACTG GGTGCTGTCG ACCCGCATGA TGCCGCCAGT AGCGGTGGCG
ATCCCGATGT TCTTCATCTT CAAGCAGTTC AACCTGCTCG ACACCTATGT CGGCGTCATA
CTCGTGCATG GTCTCATGAA CCTGCCTCTG GCGGTGCTGC TCCTGAAGAG CTTCTTCGAC
GACATCCCCG CGGAGATCGA CGAGAGCGCG CTGCTCGACG GCGCGTCGCG CTGGACGATC
TTCCGCCGCA TCGTGCTGCC GATGGCCAAG GGCGGCATAG CCGCTACCGC GGTGCTCTGC
TTTATCTTCT CATGGACGGA GTTCCTCTTC GTCCTGACCT TGACGCAGAC GGGTCTGAAG
ACCGTGCCCG TCGTGTCGTC GACCTTCGTC ACATCGATCG GAACCGCCTG GGGCAACATG
GCCGCCCTCG GTGCGGCGGC GATCGTGCCC GCCTTCATCG TGGTCCTGCT CGTTCAACGC
CATCTCGTGC GTGGTCTGAC GATGGGGTCT CTGAAGCAGT GA
 
Protein sequence
MQQSALARTL RTIAGWLVVG AFFFPIYFWT SVAFRDAKDI FNWPPIFFNF QPTVRNFEQV 
FGISLGFGYG SQEAVTPGGG NFYMGPRLWD SIVVASLSTV LAIVVATLAS YALSRMHFRG
RHEFVNWVLS TRMMPPVAVA IPMFFIFKQF NLLDTYVGVI LVHGLMNLPL AVLLLKSFFD
DIPAEIDESA LLDGASRWTI FRRIVLPMAK GGIAATAVLC FIFSWTEFLF VLTLTQTGLK
TVPVVSSTFV TSIGTAWGNM AALGAAAIVP AFIVVLLVQR HLVRGLTMGS LKQ