Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2097 |
Symbol | |
ID | 8419947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2386282 |
End bp | 2387079 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645038690 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003198959 |
Protein GI | 258406217 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0908154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAC GGACATTAGG CCTGCTCGCG TACTTCATCA TTTTGGCTGT CCCCATATAC TGGATGATCA ATACCTCATT GAAGACAGAT AACGAAATTC TCAAACAGCT CACTTTTTGG CCCAAAGATC CGACACTGAA AAATTATATC GAGATATTTA CATCCTCAAT CTGGCGCAAC AGTTTTTTTA ACTCCATTGT CTATGTCTGC TTGAATGTCC TTATCACCCT TGTCGCGGCT GTGCCTGGGG CATATGCCTT TTCCAGATGG AAATTCAGAG GTGATCATCA TCTGTTTTTC TGGCTTCTGA CCAATCGTAT GGCTCCTGCC GCCGTATTTA TGGTTCCGTT TACGGAACTC TACTACACCA TGCATATTTA TGACACACAT TGGGCGGTGG CCCTGGCGCA CTGTCTGTTC AACATCCCTC TGGCCATCTG GATCCTGGAA GGGTTCATGG CCGGGATTCC GCGTGAAATT GATGAGACGG CTTTTATCGA TGGTTATAGT TTCGGCCGTT TTTTTCGCAA GGTCTTCTTT CCGTTGATTG CCCCAGGTAT AGGTGTCGCG GCCTTCTTGT GCTTCACCTT TTCCTGGATT GAGCTCATTT TGGCCAAGGC GCTGACGGTC ACGGAAGCCA AACCGGTGGT GGTCACGTTG ACGGTGGGGA TTGGGGCGGA AGGTGTCCGC TGGGGACTGC TGGCCGCGGC TGGGGTCTTG ACCATGGTCC CCGGGGCTAT CGTGGTCTAT TTTGTCCGCA ACTATCTGGC AAAAGGCTTT GCCTTGGGAA GGGTCTGA
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Protein sequence | MKKRTLGLLA YFIILAVPIY WMINTSLKTD NEILKQLTFW PKDPTLKNYI EIFTSSIWRN SFFNSIVYVC LNVLITLVAA VPGAYAFSRW KFRGDHHLFF WLLTNRMAPA AVFMVPFTEL YYTMHIYDTH WAVALAHCLF NIPLAIWILE GFMAGIPREI DETAFIDGYS FGRFFRKVFF PLIAPGIGVA AFLCFTFSWI ELILAKALTV TEAKPVVVTL TVGIGAEGVR WGLLAAAGVL TMVPGAIVVY FVRNYLAKGF ALGRV
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