| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3840 |
|---|
| Symbol | |
|---|
| ID | 8667130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4278845 |
|---|
| End bp | 4279618 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | permease protein of sugar ABC transporter |
|---|
| Protein accession | YP_003339502 |
|---|
| Protein GI | 271965306 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0859974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0349833 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAACGC GGTACTACAG CACGATGTCG GCCCTGGCGG TGCTCTTCCT GTTCCCGCTG
CTGTGGAGCG GCTGGTCCTC CTTCGACGGA GGGGTGGGGA ACTACACCGA GATGGCCCGG
TTCGGCGAGG GCGTCGGCAC CTACCTGACC AACAGCGCGC TGGTGTCGGC GATGACCGTC
GCCGGCACGC TGGTGATCTC CGCCCTCGGC GGCTACGCCT TCGCCCGCTT CGACTTCCCC
GGCAAGAACC TGCTCTTCCT CACCACGCTG GCGATCCTGA TGGTGCCGTA CGCGACCATC
CTGATCCCGC TCTACGTCCT GCTCGGCTAC ATCGGCCTGC AGAACTCCCT GGTCGGTCTC
TCGCTCGTCT TCGTGATGTT CCAGCTGCCG TTCGCGCTGT TCATGATGCG CAACGCCTTC
GAGGCCATCC CCCGCGAGCT GGAGGAGGCC GCCCTCATCG ACGGCTGCGG CACCTTCCGG
GCCTTCTCCC GCATCCTGCT GCGCGCGGTG CGGCCCGCTC TGATCACCGT CGGCCTGTTC
GCCTTCCTCG CCTCCTGGAA CGACTTCTTC GCGCCGCTCA TCCTGCTCAA CGACGGCGCG
AGCTTCACCC TCCCGGTGGC CGTGGTCAGC ATGACCCAGC GCACGTTCGG CGCCGTCGAC
TACGGCATGT TGCAGGCGGG GGTCATGGTC ATGGCCGTGC CCTGCCTGAT CCTCTTCATC
GTTCTGCAGC GCCACTACGT GCGCGGATTC ATGTCAGGAG CGTTGCGTGG CTAG
|
|---|
| Protein sequence | MRTRYYSTMS ALAVLFLFPL LWSGWSSFDG GVGNYTEMAR FGEGVGTYLT NSALVSAMTV
AGTLVISALG GYAFARFDFP GKNLLFLTTL AILMVPYATI LIPLYVLLGY IGLQNSLVGL
SLVFVMFQLP FALFMMRNAF EAIPRELEEA ALIDGCGTFR AFSRILLRAV RPALITVGLF
AFLASWNDFF APLILLNDGA SFTLPVAVVS MTQRTFGAVD YGMLQAGVMV MAVPCLILFI
VLQRHYVRGF MSGALRG
|
|---|
| |