More than 300 homologs were found in PanDaTox collection
for query gene Rru_A2234 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007643  Rru_A2234  response regulator receiver domain-containing protein  100 
 
 		 130 aa  260  4.999999999999999e-69  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3210  response regulator receiver protein  40.34 
 
 		 124 aa  94.4  5e-19  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_1315  response regulator receiver protein  36.97 
 
 		 121 aa  81.3  0.000000000000004  Thauera sp. MZ1T  Bacteria  normal  0.0517324  n/a   
 
 
-
 
NC_008261  CPF_2180  DNA-binding response regulator  35.83 
 
 		 223 aa  78.6  0.00000000000003  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0299585  n/a   
 
 
-
 
NC_008262  CPR_1891  DNA-binding response regulator  35.83 
 
 		 223 aa  78.2  0.00000000000003  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_013132  Cpin_6438  putative two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 		 394 aa  77  0.00000000000007  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.00615091  normal  0.383003 
 
 
-
 
NC_007512  Plut_0891  response regulator receiver domain-containing protein  31.93 
 
 		 137 aa  76.3  0.0000000000001  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008576  Mmc1_0776  response regulator receiver protein  30.08 
 
 		 127 aa  76.3  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.00000835167  normal  0.370558 
 
 
-
 
NC_003909  BCE_0294  DNA-binding response regulator  37.82 
 
 		 233 aa  75.5  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0249  two component transcriptional regulator  37.82 
 
 		 233 aa  75.5  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0382139  n/a   
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  35.4 
 
 		 465 aa  75.1  0.0000000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_013501  Rmar_1797  two component, sigma54 specific, transcriptional regulator, Fis family  39.64 
 
 		 461 aa  74.3  0.0000000000004  Rhodothermus marinus DSM 4252  Bacteria  normal  0.774224  n/a   
 
 
-
 
NC_011772  BCG9842_B5021  DNA-binding response regulator  38.14 
 
 		 233 aa  74.3  0.0000000000005  Bacillus cereus G9842  Bacteria  normal  0.0330449  normal  1 
 
 
-
 
NC_005945  BAS0256  DNA-binding response regulator  38.98 
 
 		 233 aa  74.3  0.0000000000005  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK0245  response regulator  38.98 
 
 		 233 aa  74.3  0.0000000000005  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A0303  DNA-binding response regulator  38.14 
 
 		 233 aa  74.3  0.0000000000005  Bacillus cereus B4264  Bacteria  normal  0.0610099  n/a   
 
 
-
 
NC_007517  Gmet_0961  two component, sigma54 specific, Fis family transcriptional regulator  36.61 
 
 		 454 aa  74.3  0.0000000000005  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_0271  DNA-binding response regulator  38.98 
 
 		 233 aa  74.3  0.0000000000005  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.439326  n/a   
 
 
-
 
NC_011658  BCAH187_A0322  DNA-binding response regulator  37.82 
 
 		 233 aa  73.9  0.0000000000006  Bacillus cereus AH187  Bacteria  hitchhiker  0.000000418869  n/a   
 
 
-
 
NC_007513  Syncc9902_0308  two component transcriptional regulator  34.43 
 
 		 248 aa  73.9  0.0000000000006  Synechococcus sp. CC9902  Bacteria  normal  0.030574  n/a   
 
 
-
 
NC_011773  BCAH820_0296  DNA-binding response regulator  38.14 
 
 		 233 aa  73.9  0.0000000000007  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005957  BT9727_0242  response regulator  38.14 
 
 		 233 aa  73.9  0.0000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_4110  response regulator receiver protein  31.97 
 
 		 126 aa  73.9  0.0000000000007  Opitutus terrae PB90-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013173  Dbac_0418  response regulator receiver protein  32.5 
 
 		 123 aa  73.9  0.0000000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.22885  n/a   
 
 
-
 
NC_011769  DvMF_1461  two component, sigma54 specific, transcriptional regulator, Fis family  38.18 
 
 		 491 aa  73.6  0.0000000000008  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.750458 
 
 
-
 
NC_009483  Gura_4220  response regulator receiver protein  38.02 
 
 		 120 aa  73.6  0.0000000000008  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2968  response regulator receiver sensor signal transduction histidine kinase  35.54 
 
 		 392 aa  73.2  0.000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009675  Anae109_0684  two component, sigma54 specific, Fis family transcriptional regulator  35.71 
 
 		 456 aa  73.2  0.000000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_2318  chemotaxis protein CheY  33.9 
 
 		 121 aa  73.6  0.000000000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_2571  response regulator receiver sensor signal transduction histidine kinase  36.07 
 
 		 406 aa  73.2  0.000000000001  Geobacter sp. M21  Bacteria  n/a    normal  0.156881 
 
 
-
 
NC_011146  Gbem_1642  response regulator receiver sensor signal transduction histidine kinase  35.25 
 
 		 406 aa  72.8  0.000000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.905013  n/a   
 
 
-
 
NC_004116  SAG0393  DNA-binding response regulator  33.33 
 
 		 228 aa  72.8  0.000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.632289  n/a   
 
 
-
 
NC_008751  Dvul_1657  two component, sigma54 specific, Fis family transcriptional regulator  38.79 
 
 		 459 aa  72.4  0.000000000002  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.000574549  normal  0.302016 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  36.79 
 
 		 393 aa  72.8  0.000000000002  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal  1 
 
 
-
 
NC_007516  Syncc9605_2384  two component transcriptional regulator  34.43 
 
 		 259 aa  72  0.000000000002  Synechococcus sp. CC9605  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_1771  response regulator receiver protein  36.97 
 
 		 117 aa  72  0.000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_2193  two component transcriptional regulator, winged helix family  35.59 
 
 		 237 aa  72.8  0.000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0620475  n/a   
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  34.19 
 
 		 229 aa  72.4  0.000000000002  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_008639  Cpha266_1786  response regulator receiver protein  34.21 
 
 		 120 aa  72.8  0.000000000002  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0283  regulatory protein VanR  35.34 
 
 		 233 aa  72  0.000000000002  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007954  Sden_3294  response regulator receiver  31.67 
 
 		 120 aa  72.4  0.000000000002  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_0719  response regulator receiver modulated diguanylate cyclase  31.97 
 
 		 307 aa  72.8  0.000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002939  GSU0403  chemotaxis protein CheY  38.21 
 
 		 120 aa  71.6  0.000000000003  Geobacter sulfurreducens PCA  Bacteria  normal  0.286627  n/a   
 
 
-
 
NC_002947  PP_2165  response regulator  36.79 
 
 		 393 aa  71.6  0.000000000003  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_004578  PSPTO_0915  chemotaxis protein CheY  32.5 
 
 		 122 aa  72  0.000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_3286  two component, sigma54 specific, transcriptional regulator, Fis family  40.19 
 
 		 458 aa  71.6  0.000000000003  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_2598  PAS/PAC sensor hybrid histidine kinase  37.3 
 
 		 661 aa  72  0.000000000003  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3038  response regulator receiver protein  37.27 
 
 		 367 aa  71.6  0.000000000003  Shewanella baltica OS195  Bacteria  normal  0.0232368  normal  1 
 
 
-
 
NC_009484  Acry_2712  response regulator receiver protein  38.84 
 
 		 131 aa  72  0.000000000003  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_008820  P9303_26531  two-component response regulator  33.61 
 
 		 248 aa  71.6  0.000000000003  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  1 
 
 
-
 
NC_012918  GM21_0962  two component, sigma54 specific, transcriptional regulator, Fis family  40.19 
 
 		 458 aa  72  0.000000000003  Geobacter sp. M21  Bacteria  n/a    normal  0.277353 
 
 
-
 
NC_010184  BcerKBAB4_4666  two component transcriptional regulator  34.45 
 
 		 233 aa  71.6  0.000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  36.79 
 
 		 393 aa  71.6  0.000000000003  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.000168842 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  36.79 
 
 		 412 aa  71.6  0.000000000003  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  33.04 
 
 		 472 aa  71.6  0.000000000003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_0631  response regulator receiver protein  30.83 
 
 		 121 aa  72  0.000000000003  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_2906  response regulator receiver protein  37.27 
 
 		 367 aa  71.6  0.000000000004  Shewanella baltica OS185  Bacteria  normal  0.0132666  n/a   
 
 
-
 
NC_007005  Psyr_0788  response regulator receiver  32.5 
 
 		 122 aa  71.6  0.000000000004  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011145  AnaeK_0445  two component, sigma54 specific, transcriptional regulator, Fis family  33.61 
 
 		 481 aa  71.2  0.000000000004  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  36.36 
 
 		 454 aa  71.2  0.000000000004  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  34.45 
 
 		 474 aa  71.2  0.000000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_012918  GM21_3929  response regulator receiver protein  38.21 
 
 		 120 aa  71.2  0.000000000004  Geobacter sp. M21  Bacteria  n/a    normal  0.0321819 
 
 
-
 
NC_009483  Gura_2994  response regulator receiver protein  32.74 
 
 		 121 aa  71.6  0.000000000004  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_2896  response regulator receiver protein  37.27 
 
 		 367 aa  71.2  0.000000000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.00201335  n/a   
 
 
-
 
NC_011663  Sbal223_1467  response regulator receiver protein  37.27 
 
 		 367 aa  71.2  0.000000000004  Shewanella baltica OS223  Bacteria  normal  0.0140274  normal  1 
 
 
-
 
NC_008819  NATL1_02061  two-component response regulator  33.61 
 
 		 248 aa  70.9  0.000000000005  Prochlorococcus marinus str. NATL1A  Bacteria  normal  1  normal  0.540525 
 
 
-
 
NC_013165  Shel_23040  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.04 
 
 		 229 aa  71.2  0.000000000005  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.318653  normal  1 
 
 
-
 
NC_009483  Gura_3335  two component, sigma-54 specific, Fis family transcriptional regulator  36.94 
 
 		 458 aa  70.9  0.000000000006  Geobacter uraniireducens Rf4  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0238  two component transcriptional regulator, winged helix family protein  34.48 
 
 		 224 aa  70.9  0.000000000006  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_2442  two component, sigma54 specific, Fis family transcriptional regulator  31.93 
 
 		 441 aa  70.9  0.000000000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011146  Gbem_3845  response regulator receiver protein  38.21 
 
 		 120 aa  70.9  0.000000000006  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_2160  two component signal transduction response regulator  37.39 
 
 		 451 aa  70.5  0.000000000007  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00000278347  n/a   
 
 
-
 
NC_010814  Glov_1377  two component, sigma54 specific, transcriptional regulator, Fis family  37.17 
 
 		 462 aa  70.5  0.000000000007  Geobacter lovleyi SZ  Bacteria  normal  0.244526  n/a   
 
 
-
 
NC_007517  Gmet_3119  response regulator receiver domain-containing protein  37.4 
 
 		 120 aa  70.5  0.000000000007  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007760  Adeh_0833  two component, sigma54 specific, Fis family transcriptional regulator  37.17 
 
 		 466 aa  70.5  0.000000000007  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.96038  n/a   
 
 
-
 
NC_008609  Ppro_1138  multi-sensor hybrid histidine kinase  34.4 
 
 		 983 aa  70.5  0.000000000007  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_1643  two component, sigma54 specific, Fis family transcriptional regulator  35.9 
 
 		 444 aa  70.5  0.000000000008  Opitutus terrae PB90-1  Bacteria  normal  0.415197  normal  1 
 
 
-
 
NC_007517  Gmet_0776  two component, sigma54 specific, Fis family transcriptional regulator  38.05 
 
 		 454 aa  70.5  0.000000000008  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0044  two component transcriptional regulator, winged helix family  35.59 
 
 		 224 aa  70.5  0.000000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_2507  response regulator receiver protein  36.67 
 
 		 121 aa  70.1  0.000000000008  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010625  Bphy_6519  two component heavy metal response transcriptional regulator  41.03 
 
 		 228 aa  70.1  0.000000000009  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0435386 
 
 
-
 
NC_002939  GSU0811  nitrogen regulation protein NtrX  37.17 
 
 		 456 aa  70.1  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.686874  n/a   
 
 
-
 
NC_013161  Cyan8802_1264  response regulator receiver protein  33.05 
 
 		 122 aa  70.1  0.00000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.0578681  hitchhiker  0.00155192 
 
 
-
 
NC_011726  PCC8801_1234  response regulator receiver protein  33.05 
 
 		 122 aa  70.1  0.00000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  30.4 
 
 		 226 aa  70.1  0.00000000001  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_011769  DvMF_0064  histidine kinase  35.59 
 
 		 598 aa  69.7  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_007335  PMN2A_1500  two component transcriptional regulator  32.79 
 
 		 248 aa  69.7  0.00000000001  Prochlorococcus marinus str. NATL2A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_4753  PAS/PAC sensor hybrid histidine kinase  32.26 
 
 		 630 aa  69.7  0.00000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_1802  two component, sigma-54 specific, Fis family transcriptional regulator  32.46 
 
 		 459 aa  69.7  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0135454  n/a   
 
 
-
 
NC_013173  Dbac_1417  response regulator receiver protein  33.91 
 
 		 120 aa  69.7  0.00000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.212789  n/a   
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  34.21 
 
 		 480 aa  70.1  0.00000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.038607 
 
 
-
 
NC_012560  Avin_18020  sigma54-dependent response regulator of C4 dicarboxylate transport, two component; DctD  36.52 
 
 		 446 aa  69.7  0.00000000001  Azotobacter vinelandii DJ  Bacteria  normal  0.266513  n/a   
 
 
-
 
NC_011146  Gbem_0243  two component transcriptional regulator, winged helix family  38.33 
 
 		 224 aa  69.7  0.00000000001  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000226454  n/a   
 
 
-
 
NC_012918  GM21_0227  two component transcriptional regulator, winged helix family  37.61 
 
 		 224 aa  69.7  0.00000000001  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_008609  Ppro_1380  response regulator receiver modulated diguanylate cyclase  35.43 
 
 		 454 aa  70.1  0.00000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00781234  n/a   
 
 
-
 
NC_010322  PputGB1_0297  two component transcriptional regulator  34.13 
 
 		 240 aa  69.7  0.00000000001  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008817  P9515_01621  two-component response regulator  32.77 
 
 		 248 aa  69.3  0.00000000001  Prochlorococcus marinus str. MIT 9515  Bacteria  normal  0.367767  n/a   
 
 
-
 
NC_007517  Gmet_1243  histidine kinase  35.2 
 
 		 654 aa  69.3  0.00000000002  Geobacter metallireducens GS-15  Bacteria  normal  1  normal  0.0706231 
 
 
-
 
NC_007519  Dde_1018  response regulator receiver domain-containing protein  33.06 
 
 		 131 aa  68.9  0.00000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.100773  n/a   
 
 
-
 
NC_010505  Mrad2831_0204  two component transcriptional regulator  37.6 
 
 		 242 aa  68.9  0.00000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.00392261  normal  1 
 
 
-
 
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