Gene Gmet_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_1243 
Symbol 
ID3738786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1400215 
End bp1402179 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content56% 
IMG OID637778523 
Producthistidine kinase 
Protein accessionYP_384204 
Protein GI78222457 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.0706231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT TCGACGAGCT GAAAAACCGT CGTGACAGCG TGGGACTGAG GTTCTTCCTC 
CTGTTCACAC TCTTTATCGC GGTAATTTCG ATTTCGTTTA CGGTTTTCTT CTTCCAGCAA
CAGCGAAGCG CCCTGAGGGA TAGTCTGGTC AACGAGGGGA AACTCCTGGC GAGACTCCTG
GCCCACAATA CCCGTCTCGG TGTTTTTGCC GAAAATGCAG AACTTCTGCG GGACCCCATC
CAGGGTATTC TGGAACACGA AGGAGTCCTT TTTGTCACCA TCGTGACGGC AGAAGGTAAA
GCACTCCAGG AACAGGCACA CAAGAGTGTT ATCAACAATT CCGGCCGGGC CTTTCCCCAT
TGGAGCACCC GCTTCGAACG GCTGAAAGGG ACAACCGAGC CCTCGGTCTT CGAGGGAGAT
GACATCTTCG AGTTCTGGGC ACCAGTACTG TCGAGTTCAT CCTTCCCCAC GGACGGATCA
TTGTTCCTCG ACCAACCCCC ACGGCCAACG CCCCGCGTTA TCGGTTATGC GCGAATCATC
GTCGACAAGA GCCTTCTCGG GAAAAAACTC GACACGCTCC TCTACACAAG CGTCCTCATG
GCAGCGGGCT TTCTCCTCCT CGGCACCTTC TTCACCTACG TCATAACCCG TAGAATTACG
CGCCCCCTCG ACCGACTCAC CGAAGGGATC AGGGTTCTCG AAAGTTCTGG TTCATTCGAG
CCTGTCCCCG TGGAATCGAA GGATGAGATC GGCCGGCTCG CCACGGCGTT CAACCACCTG
GGCACTACAC TGAAAACCCG TGAGGCCGAG AAGGAACTCC TGGCCGAGGA ACTCCGCCAT
GCCCAGAAGA TGGAGGCTAT CGGAACACTT GCCGGGGGGG TAGCCCACGA TTTCAACAAC
ATACTCACTG CCATCGTTGG CTTCGGAACG CTTCTGCAGC GCAGCCTCAA GACTGACAAC
CCCTATCGCA TTTACGTGGA ACAGATTCTC TCAGCCGCTG ACCGGGCCAC CAACCTCGTC
AAACGGCTCC TCGCCTTCGG CAGGAAGCAG GTAATCTCTC CTCACCCGAC GAATCTGAAT
GACATTGTGA AGGGTATAGA GAAACTTCTC CATCGACTGG TGAGCGAGGA TATCACCTTT
GTAACCTCGC TCTCCAGCGA ACCCCTCGTG TGCCATGTGG ATGCGGGGCA AATCGACCAG
ATCCTGATGA ATCTCGTGAC AAACGCCCGC GACGCCATGC CGGACGGCGG CACGCTTACT
GTTACGACGG GGAGCGACTT CCTGGAAGAA GATTTCTTCG GTCCCCTTGA AAAGGGAAAA
ACCGGCTACT ACGCAATTCT GACCATTGCA GATTCGGGCA CCGGCATGGA CTGCGAAACA
CAGGAACGCA TCTTCGACCC CTTCTTCACC ACCAAGGAGG TCGGCAAGGG AACAGGGCTC
GGCCTCTCCA TGGTCTACGG CATCGTCAAG CAGCACGAGG GATTCATCAC CGTTGATTCA
GAGATAGGGA AAGGAACTGC CGTCAGAATT TACCTTCCCA TCGTGGCGCC AAAGGAGACC
ACGGAGCACC GCGACGCAAC GGCGGCCGCC CAGGGGAACC AGGAGACCAT CCTGATAGCC
GAAGACGACC GGGACGTGCG CAAGCTCTCG AAGCTCGTTC TTGAACGCAA CGGCTACACC
GTCATCGAAG CGAGCGACGG TGCCGAGGCT GTCCGGCGGT TCATGGAGAA CAGCACCCGG
ATAGACCTTC TGCTTCTCGA TGTGGTTATG CCCAAAAGGA ACGGCCAGTC CGTCTATGAA
GAGATCCGGA ACATCCGGCC GGAGATGAAG GCGCTCTTCA TCAGCGGCTA CACCCAGGAC
ATCATCAGCC GGAAAGGGGT CCTCGACGAG GGGATCAACT TCATAGCGAA ACCGGTGAAA
CCGGACGAAC TCCTGGCAAA GATCAAAGAG GTATTACAGA ACTGA
 
Protein sequence
MDFFDELKNR RDSVGLRFFL LFTLFIAVIS ISFTVFFFQQ QRSALRDSLV NEGKLLARLL 
AHNTRLGVFA ENAELLRDPI QGILEHEGVL FVTIVTAEGK ALQEQAHKSV INNSGRAFPH
WSTRFERLKG TTEPSVFEGD DIFEFWAPVL SSSSFPTDGS LFLDQPPRPT PRVIGYARII
VDKSLLGKKL DTLLYTSVLM AAGFLLLGTF FTYVITRRIT RPLDRLTEGI RVLESSGSFE
PVPVESKDEI GRLATAFNHL GTTLKTREAE KELLAEELRH AQKMEAIGTL AGGVAHDFNN
ILTAIVGFGT LLQRSLKTDN PYRIYVEQIL SAADRATNLV KRLLAFGRKQ VISPHPTNLN
DIVKGIEKLL HRLVSEDITF VTSLSSEPLV CHVDAGQIDQ ILMNLVTNAR DAMPDGGTLT
VTTGSDFLEE DFFGPLEKGK TGYYAILTIA DSGTGMDCET QERIFDPFFT TKEVGKGTGL
GLSMVYGIVK QHEGFITVDS EIGKGTAVRI YLPIVAPKET TEHRDATAAA QGNQETILIA
EDDRDVRKLS KLVLERNGYT VIEASDGAEA VRRFMENSTR IDLLLLDVVM PKRNGQSVYE
EIRNIRPEMK ALFISGYTQD IISRKGVLDE GINFIAKPVK PDELLAKIKE VLQN