Gene Ppro_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2598 
Symbol 
ID4572931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2820309 
End bp2822294 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content58% 
IMG OID639756648 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_902260 
Protein GI118581010 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCGG TCTTTATCGT TGATGACAAT GGCCAGGGCA TGGAGAAGGC GCGGGCCCTG 
CTTCGTGACC ACGGCTATTC GGTTTGCGAT TCAGACCCGG AAGCGGATGA CGCGATGCGC
TTCCAGTTCG CCATGGACCG CGCCTGTATC CAGGTATTCT GGCTTTTCGA GAACGGTCGC
CTCGTTTATG TCAACGAAGC GGCCTGCCGC TCTCTGGGGT ACGGACACGA GGAACTGGCA
GGCATGACCG TGTACGACAT CTCCCCCCAC TGTACTGTGG AAGAGTATGC GGCGCTCTGG
CAGCAGACAC GAAAGCAGGG GGTTGATCGG TTTGAAGCAG TGCACCAGAC CAGGGATGGC
CGCACCTATC CGGTGGAAAT CCAGTCGAAC TTCGTTGAAT TCGAGGGGTG TGAATACTGC
TGCTGTTTCG TGACCGACAT CAGTGAACGC AAGCGGGCCG AGGAGAAGCT CCTGCTGCAC
GAGTTCTGCA TCGAGAAGGC CTCCATCGGC ATTTTTTTGA TATCGATGGA CGGGAGGATT
GCCATGGCCA ACGAGTGCGC ATGCAGGAGC CTCGGCTATT CCAGCGATGA ATTATGTGCC
ATGACCGTCA TTGACATCGA TCCGGCCATT ACCGTTGAAA AGATACGTGC AATCGTAGAG
CAGCTGGAAA CCAACGGCTC CGTGACGCAC GAAACCGTTC ACCGCCACAG GGACGGCACC
ACCTTTCCGG TGGAGATAAC GACCAACAAC ATCGAATTCC ATGGAGCCAC ATATTCCTAC
TCCTTTGCCA AGGACATCAG CGGACGGAAA CAGGCCGAGG AGAAGCGGAA GCTTCTCGAA
ACGCAGCTTC ACCAGATGCA GAAGCTGGAT GCCGTGGGAC AACTGGCCGG CGGCATAGCC
CACGACTTCA ACAACATCCT CACGGCCATC ATAGGGTTTG CCGAGGTCAT GGACATGCGC
ATGGAGCAGG GCGCCCCCCT CCGGCACCAT GTCAGACAGA TCCTGGCTGC GGCGGAGAGG
GCCGCAGACC TCACCCAGGG ACTGCTGGCG TTCAGTCGCA AGCAGGTGCT GCACGTCAGG
TGCCTGGATC TGCGCGAGAT CATCGACGGC CTCAAAAAAA TGCTGTGCAG GCTGATACCG
GAGGACATCG ACTTCAGGGT AAAGACCGCG GCAACGGAGA TGACCGTCAT GGCGGACAGG
GGGCAGATCG AACAGGTGCT CATGAACCTG GTGACCAATG CCCGGGACGC CATGCCAGGC
GGAGGAGTGC TGACAATCAA GACCGGCACC GGCGTCATCG ACGAGGAGTT TGTGAGGACA
AACGGTTTCG GGGTTATGGG GAATTACGCC TTGATCAGCG TCACGGACAA TGGCTGCGGC
ATGAATGCGG AGACGCGGGA AAAGGTCTTC GAGCCGTTCT TTACCACCAA GAGGCGCGGC
AAGGGGACCG GCCTCGGCCT CTCCATCATC TACGGCATCG TCAAGCAGCA TGATGGGTTC
ATCACCGTCG ACAGTTCGCC GGGACAGGGT GCGACCTTCC GCGTCTACCT CCCCCTGGCA
GGCAGGGAAA AGGAGGAGAC TCGCGAACAC CGTCAGACGC CCCTGCCAAA ACGGGGAAAC
GAAACGGTTC TACTGGTGGA AGACGACGAG GTGGTGCGTG AACTAAACCG GGCCGTCCTG
GAATATGCTG GGTATACGGT GATCGAAACC ATCGACGGCC GGGAGGCCCT GGAGAGGTTC
AGGGAGCAGA GTCACCGGAT GGACATCCTG GTCAGCGACA TCATCATGCC CAACCTGGAC
GGAAAGGCGC TCTACGACGA GATCATGAAG ATCCGGCCTG ACATGAAGGT ACTCTTCATC
AGCGGGTATG CGGAGGACGC CCTTGACGCC AGGGGCCTGT TCGAAAGCGA GCACAACTTC
ATGCCCAAAC CGGTCAAACC GTCGGAGCTC CTGAAAAGGG TGCGGGAGAT CCTCGACCAC
CCCTGA
 
Protein sequence
MISVFIVDDN GQGMEKARAL LRDHGYSVCD SDPEADDAMR FQFAMDRACI QVFWLFENGR 
LVYVNEAACR SLGYGHEELA GMTVYDISPH CTVEEYAALW QQTRKQGVDR FEAVHQTRDG
RTYPVEIQSN FVEFEGCEYC CCFVTDISER KRAEEKLLLH EFCIEKASIG IFLISMDGRI
AMANECACRS LGYSSDELCA MTVIDIDPAI TVEKIRAIVE QLETNGSVTH ETVHRHRDGT
TFPVEITTNN IEFHGATYSY SFAKDISGRK QAEEKRKLLE TQLHQMQKLD AVGQLAGGIA
HDFNNILTAI IGFAEVMDMR MEQGAPLRHH VRQILAAAER AADLTQGLLA FSRKQVLHVR
CLDLREIIDG LKKMLCRLIP EDIDFRVKTA ATEMTVMADR GQIEQVLMNL VTNARDAMPG
GGVLTIKTGT GVIDEEFVRT NGFGVMGNYA LISVTDNGCG MNAETREKVF EPFFTTKRRG
KGTGLGLSII YGIVKQHDGF ITVDSSPGQG ATFRVYLPLA GREKEETREH RQTPLPKRGN
ETVLLVEDDE VVRELNRAVL EYAGYTVIET IDGREALERF REQSHRMDIL VSDIIMPNLD
GKALYDEIMK IRPDMKVLFI SGYAEDALDA RGLFESEHNF MPKPVKPSEL LKRVREILDH
P