| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0238 |
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| Symbol | |
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| ID | 4278671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 264859 |
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| End bp | 265533 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638132992 |
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| Product | two component transcriptional regulator, winged helix family protein |
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| Protein accession | YP_748939 |
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| Protein GI | 114561426 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTGT TGTTAATTGA AGACTCTGAA GCACTTCGTC GCGGCATTAG AGTTGGGTTA
GATCATTTAG GTTATACCGT TGATGAAACA GGTGATGGTT CTGAGGGCTT AAGCATGGCG
CTCACAAATT CTTATGATTT CATTATTTTG GATCTCATGC TGCCTAATGT AGATGGTCTG
AGTTTACTTA AGAGTATTCG TAAATTAGGT AATCAGTCTA AGGTCATTAT TTTATCGGCT
AAATCACAAG CCGAAGATCG TGTTACTGGC TTATTGGCGG GTGCTGATGA TTATCTGAGT
AAACCATTTT CGTTTGACGA ATTACAAGCC AGATTACTTT GCCTAGGCCG CCGTGGTGAA
CTCAATCAAC AAGTTAAAAC TATTTGTGTT GCGAACTTTG TTTTAGACAC AAATAACAAA
TCACTTCATG CAGATGGCCA TTACATCGAC TTAACCAAAA ACGAATTTAA AATTGTTGAA
TATTTATTTA GTAACCCTAA GCAAGTACTT AATCCTGAAC AAATCAGCGA AGCAGTAGTG
GGTTCATTTA ATCATTTATC GAAAAATACT ATCGAGGCTC ATTTATCGTC AGTGCGTAAA
AAAGCTAAAG CCGTTGGGGT GACGCTACCG ATAAAAAATA AACGTGGTTT TGGTTATTTT
GTAGGTGAAC ATTAA
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| Protein sequence | MKVLLIEDSE ALRRGIRVGL DHLGYTVDET GDGSEGLSMA LTNSYDFIIL DLMLPNVDGL
SLLKSIRKLG NQSKVIILSA KSQAEDRVTG LLAGADDYLS KPFSFDELQA RLLCLGRRGE
LNQQVKTICV ANFVLDTNNK SLHADGHYID LTKNEFKIVE YLFSNPKQVL NPEQISEAVV
GSFNHLSKNT IEAHLSSVRK KAKAVGVTLP IKNKRGFGYF VGEH
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