Gene Gmet_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_0961 
Symbol 
ID3738202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp1070933 
End bp1072297 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content64% 
IMG OID637778240 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_383928 
Protein GI78222181 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAC GGGTGCTGGT CATCGACGAC GAGGAGAACC TGCGGCACAT GCTTGGGGCC 
ATGCTTCGCA AGAACGGCTA CCATGCCGAC GAGGCGGCGG ACGGTGAGCA GGCCCTCGCC
ATGGCGGGGG AGCATCCCTA TGACTTTATC ATCTGCGATA TCCGGATGCC GGTCCTGGAT
GGGCTCGGTT TCCTCCGCAG GGCCCAGGAG GCGGGGATAG GTGGCACCAT CATCATGATG
TCCGCCTATG GCACCATCGA TACGGCGCTC CAGTGCATGA AGGAGGGGGC CTACGACTAC
GTTTCCAAGC CCTTCAAAAA CGACGAGATC CTGCTGGTGC TCAAGAAGGC CGAGGAGCGG
GAGCGGCTCA AAACGGAAAA CTGCCGGCTG CGGGCTGAGG TTGCCCGGGA GTACTCCTTC
GGCGCCATCG TGAGCCGCAA TCCTCGGATG CGGGAGATTT TCGAGCTCAT CCGCAAGGTC
TGCGACGTGA AGACTTCGGT CCTCGTCCTG GGCGAATCGG GCACCGGCAA GGAACTGGTG
GCCCGGGCCA TTCACCACAA CGGGAGCCGC CGGGATGCTC CCTTTGTGGC GGTAAACTGC
GGCGCCATCC CCGAGCACCT TCTGGAATCG GAGCTCTTCG GCCACGTGCG GGGCGCCTTC
ACCGACGCCG CCTCCGACCG GACCGGGCTC TTCGAGGAGG CCCACGGCGG CACCCTTTTC
CTGGACGAAA TTGGCGAGAT GCCCCCCTCG CTCCAGGTGA AGCTGTTGCG GGTCCTCCAG
GAGGGGGAGG TGCGGCGCGT GGGGGCCGAG CGCCTCTCAA AGGTCGACGT GCGGGTTATC
TCGGCCACAT CCCGGGATCT GGAGCGGGAG GTGGCCGAGG GGCACTTCCG CGAGGATCTC
TTCTTCCGTC TTAACGTCGT CAGCATCACC CTTCCCCCCC TGCGGGAGCG GCTGGAGGAC
GTGCCGCTCC TCGCGGGCCA TTTTCTTAAT AAACACGGCA CTTCCCTTGG GAGGCCGGGA
GCGCGGGTGT CTCCCGAGGC GTTGCGGCTC CTTTCCGCGT ACGCATGGCC CGGCAACGTG
CGGGAGTTGG AGAACTGCAT TGAGCGGGCC CTCATCCTGG GAGACGGTGA TGTTGTCGGC
CCCGGGGCGC TCCCGGACGG GCTGCGGGGA GGTGGCGCGG GGTGGGCTAT GGTGGGCCCG
GACAACGACA ATCTCTCCAT CAAAAAGGCC GAGGAGCGGC TTGAGCGGGA GTTCATACGC
CGCGCCCTCG AAAAGACCGG CGGCAACCGC ACCCACGCGG CCCGGATCCT GGAAATCAGC
CACCGTGCTT TGCTCTACAA ACTGAAAGAG TATGATATGG AATAA
 
Protein sequence
MKQRVLVIDD EENLRHMLGA MLRKNGYHAD EAADGEQALA MAGEHPYDFI ICDIRMPVLD 
GLGFLRRAQE AGIGGTIIMM SAYGTIDTAL QCMKEGAYDY VSKPFKNDEI LLVLKKAEER
ERLKTENCRL RAEVAREYSF GAIVSRNPRM REIFELIRKV CDVKTSVLVL GESGTGKELV
ARAIHHNGSR RDAPFVAVNC GAIPEHLLES ELFGHVRGAF TDAASDRTGL FEEAHGGTLF
LDEIGEMPPS LQVKLLRVLQ EGEVRRVGAE RLSKVDVRVI SATSRDLERE VAEGHFREDL
FFRLNVVSIT LPPLRERLED VPLLAGHFLN KHGTSLGRPG ARVSPEALRL LSAYAWPGNV
RELENCIERA LILGDGDVVG PGALPDGLRG GGAGWAMVGP DNDNLSIKKA EERLEREFIR
RALEKTGGNR THAARILEIS HRALLYKLKE YDME