More than 300 homologs were found in PanDaTox collection
for query gene Rfer_0264 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_0806  acyl-CoA dehydrogenase domain-containing protein  68.42 
 
 
563 aa  752    Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4406  acyl-CoA dehydrogenase domain protein  68.06 
 
 
589 aa  765    Variovorax paradoxus S110  Bacteria  normal  0.277319  n/a   
 
 
-
 
NC_007908  Rfer_0264  acyl-CoA dehydrogenase-like  100 
 
 
569 aa  1164    Rhodoferax ferrireducens T118  Bacteria  normal  0.39187  n/a   
 
 
-
 
NC_007948  Bpro_3118  acyl-CoA dehydrogenase-like  73.78 
 
 
575 aa  827    Polaromonas sp. JS666  Bacteria  normal  0.042843  normal  0.221606 
 
 
-
 
NC_012560  Avin_14270  acyl-CoA dehydrogenase  53.28 
 
 
585 aa  570  1e-161  Azotobacter vinelandii DJ  Bacteria  normal  0.0419167  n/a   
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  49.91 
 
 
595 aa  563  1.0000000000000001e-159  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  51.29 
 
 
595 aa  549  1e-155  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  51.3 
 
 
595 aa  549  1e-155  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  51.48 
 
 
595 aa  549  1e-155  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  51.67 
 
 
595 aa  549  1e-155  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  51.11 
 
 
595 aa  548  1e-154  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
595 aa  544  1e-153  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  51.11 
 
 
595 aa  545  1e-153  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  48.19 
 
 
595 aa  541  1e-153  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
595 aa  544  1e-153  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  48.19 
 
 
595 aa  541  1e-153  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  48.36 
 
 
595 aa  542  1e-153  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  48.19 
 
 
595 aa  541  1e-153  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
595 aa  544  1e-153  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  48.79 
 
 
595 aa  544  1e-153  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  48.54 
 
 
595 aa  544  1e-153  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  50.28 
 
 
595 aa  540  9.999999999999999e-153  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  55.03 
 
 
595 aa  540  9.999999999999999e-153  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  48.45 
 
 
595 aa  539  9.999999999999999e-153  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  50.09 
 
 
599 aa  538  9.999999999999999e-153  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  55.03 
 
 
595 aa  540  9.999999999999999e-153  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  55.03 
 
 
595 aa  540  9.999999999999999e-153  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_0987  acyl-CoA dehydrogenase domain-containing protein  54.4 
 
 
597 aa  536  1e-151  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_009512  Pput_2404  acyl-CoA dehydrogenase domain-containing protein  52.01 
 
 
581 aa  533  1e-150  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010531  Pnec_0962  acyl-CoA dehydrogenase domain protein  48.37 
 
 
595 aa  530  1e-149  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  51.39 
 
 
596 aa  530  1e-149  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_002947  PP_3354  acyl-CoA dehydrogenase, ferrulic acid biotransformation protein, putative  52.72 
 
 
584 aa  519  1e-146  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_0810  acyl-CoA dehydrogenase domain protein  51.8 
 
 
598 aa  518  1.0000000000000001e-145  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2761  acyl-CoA dehydrogenase domain-containing protein  52.43 
 
 
596 aa  513  1e-144  Delftia acidovorans SPH-1  Bacteria  normal  0.431568  normal 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  47.05 
 
 
598 aa  511  1e-143  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_011992  Dtpsy_0571  acyl-CoA dehydrogenase domain protein  50.8 
 
 
598 aa  509  1e-143  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  48.24 
 
 
598 aa  504  1e-141  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  50.4 
 
 
598 aa  502  1e-141  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_010501  PputW619_2051  acyl-CoA dehydrogenase domain-containing protein  51.79 
 
 
582 aa  504  1e-141  Pseudomonas putida W619  Bacteria  normal  0.763745  normal  0.942384 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  52.25 
 
 
601 aa  495  1e-139  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1337  acyl-CoA dehydrogenase domain-containing protein  51.34 
 
 
601 aa  493  9.999999999999999e-139  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  47.75 
 
 
596 aa  495  9.999999999999999e-139  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_012560  Avin_45920  acyl-CoA dehydrogenase  47.96 
 
 
601 aa  493  9.999999999999999e-139  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_1224  acyl-CoA dehydrogenase domain-containing protein  51.2 
 
 
598 aa  491  1e-137  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  47.36 
 
 
601 aa  490  1e-137  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
NC_007908  Rfer_3519  acyl-CoA dehydrogenase-like  45.93 
 
 
598 aa  490  1e-137  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  47.58 
 
 
594 aa  489  1e-137  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_008025  Dgeo_0105  acyl-CoA dehydrogenase-like protein  53.35 
 
 
612 aa  486  1e-136  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4445  acyl-CoA dehydrogenase domain-containing protein  49.44 
 
 
626 aa  488  1e-136  Xanthobacter autotrophicus Py2  Bacteria  normal  0.744679  normal  0.0140421 
 
 
-
 
NC_009439  Pmen_4081  acyl-CoA dehydrogenase domain-containing protein  46.37 
 
 
601 aa  486  1e-136  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0368  acyl-CoA dehydrogenase domain-containing protein  45.91 
 
 
601 aa  482  1e-135  Pseudomonas putida KT2440  Bacteria  normal  0.335716  normal 
 
 
-
 
NC_007492  Pfl01_5170  Acyl-CoA dehydrogenase-like  46.47 
 
 
601 aa  483  1e-135  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.131109  normal  0.317042 
 
 
-
 
NC_010322  PputGB1_0398  acyl-CoA dehydrogenase domain-containing protein  45.91 
 
 
601 aa  483  1e-135  Pseudomonas putida GB-1  Bacteria  normal  0.257074  normal 
 
 
-
 
NC_009512  Pput_0394  acyl-CoA dehydrogenase domain-containing protein  45.91 
 
 
601 aa  482  1e-135  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_09630  putative acyl-CoA dehydrogenase  47.12 
 
 
593 aa  483  1e-135  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.806665  normal 
 
 
-
 
NC_002947  PP_3554  acyl-CoA dehydrogenase domain-containing protein  47.26 
 
 
589 aa  481  1e-134  Pseudomonas putida KT2440  Bacteria  normal  0.244117  normal 
 
 
-
 
NC_008463  PA14_06600  putative acyl-CoA dehydrogenase  46.47 
 
 
601 aa  480  1e-134  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010581  Bind_3270  acyl-CoA dehydrogenase domain-containing protein  44.37 
 
 
589 aa  479  1e-134  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.928041  normal 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  46.92 
 
 
594 aa  481  1e-134  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009512  Pput_2220  acyl-CoA dehydrogenase domain-containing protein  48.04 
 
 
594 aa  481  1e-134  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0606  putative acyl-CoA dehydrogenase  46.28 
 
 
601 aa  479  1e-134  Pseudomonas aeruginosa PA7  Bacteria  normal  0.941769  n/a   
 
 
-
 
NC_009656  PSPA7_0899  putative acyl-CoA dehydrogenase  46.94 
 
 
593 aa  479  1e-134  Pseudomonas aeruginosa PA7  Bacteria  normal  0.183433  n/a   
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  47.48 
 
 
592 aa  480  1e-134  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_007912  Sde_1885  putative acyl-CoA dehydrogenase  45.45 
 
 
595 aa  477  1e-133  Saccharophagus degradans 2-40  Bacteria  normal  0.137162  normal 
 
 
-
 
NC_010322  PputGB1_2368  acyl-CoA dehydrogenase domain-containing protein  47.85 
 
 
589 aa  478  1e-133  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_0462  acyl-CoA dehydrogenase domain-containing protein  46.5 
 
 
597 aa  477  1e-133  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.29438  normal 
 
 
-
 
NC_010501  PputW619_4834  acyl-CoA dehydrogenase domain-containing protein  45.35 
 
 
601 aa  476  1e-133  Pseudomonas putida W619  Bacteria  normal  normal  0.649579 
 
 
-
 
NC_004578  PSPTO_0500  acyl-CoA dehydrogenase family protein  45.35 
 
 
601 aa  474  1e-132  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.837085  n/a   
 
 
-
 
NC_007005  Psyr_4681  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  45.54 
 
 
601 aa  474  1e-132  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  47.64 
 
 
592 aa  475  1e-132  Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  46.42 
 
 
592 aa  474  1e-132  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008687  Pden_3224  acyl-CoA dehydrogenase domain-containing protein  46 
 
 
584 aa  472  1e-132  Paracoccus denitrificans PD1222  Bacteria  normal  normal 
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  46.27 
 
 
596 aa  473  1e-132  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_007912  Sde_3132  acyl-CoA dehydrogenase family protein  46.8 
 
 
589 aa  474  1e-132  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3693  acyl-CoA dehydrogenase domain-containing protein  47.84 
 
 
591 aa  475  1e-132  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  46.17 
 
 
603 aa  474  1e-132  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009524  PsycPRwf_0912  acyl-CoA dehydrogenase domain-containing protein  45.59 
 
 
597 aa  474  1e-132  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2048  acyl-CoA dehydrogenase, putative  47.65 
 
 
616 aa  472  1.0000000000000001e-131  Pseudomonas putida KT2440  Bacteria  normal  0.681425  normal 
 
 
-
 
NC_009720  Xaut_0623  acyl-CoA dehydrogenase domain-containing protein  49.26 
 
 
585 aa  469  1.0000000000000001e-131  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  46.75 
 
 
598 aa  471  1.0000000000000001e-131  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0400  acyl-CoA dehydrogenase domain-containing protein  45.94 
 
 
592 aa  467  9.999999999999999e-131  Pseudomonas putida GB-1  Bacteria  normal  normal  0.672876 
 
 
-
 
NC_012560  Avin_25210  acyl-CoA dehydrogenase  46.54 
 
 
591 aa  466  9.999999999999999e-131  Azotobacter vinelandii DJ  Bacteria  normal  0.885326  n/a   
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  45.62 
 
 
598 aa  466  9.999999999999999e-131  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_010322  PputGB1_2808  acyl-CoA dehydrogenase domain-containing protein  47.62 
 
 
592 aa  466  9.999999999999999e-131  Pseudomonas putida GB-1  Bacteria  normal  0.566358  normal 
 
 
-
 
NC_008740  Maqu_2749  acyl-CoA dehydrogenase domain-containing protein  45.13 
 
 
596 aa  468  9.999999999999999e-131  Marinobacter aquaeolei VT8  Bacteria  normal  0.59666  n/a   
 
 
-
 
NC_002947  PP_0370  acyl-CoA dehydrogenase domain-containing protein  51.19 
 
 
592 aa  462  1e-129  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_007204  Psyc_0965  putative acyl-CoA dehydrogenase  44.9 
 
 
597 aa  464  1e-129  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.314138 
 
 
-
 
NC_010501  PputW619_4832  acyl-CoA dehydrogenase domain-containing protein  45.96 
 
 
592 aa  464  1e-129  Pseudomonas putida W619  Bacteria  normal  normal  0.946881 
 
 
-
 
NC_007492  Pfl01_5166  Acyl-CoA dehydrogenase-like  45.27 
 
 
592 aa  465  1e-129  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.164353 
 
 
-
 
NC_007643  Rru_A1308  Acyl-CoA dehydrogenase  45.91 
 
 
596 aa  464  1e-129  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.135322  n/a   
 
 
-
 
NC_009512  Pput_0396  acyl-CoA dehydrogenase domain-containing protein  51.19 
 
 
592 aa  462  1e-129  Pseudomonas putida F1  Bacteria  normal  0.352257  normal 
 
 
-
 
NC_007969  Pcryo_1452  acyl-CoA dehydrogenase-like  44.36 
 
 
597 aa  464  1e-129  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3819  acyl-CoA dehydrogenase domain-containing protein  45.64 
 
 
590 aa  463  1e-129  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0607  putative acyl-CoA dehydrogenase  46.13 
 
 
598 aa  461  9.999999999999999e-129  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  46.59 
 
 
598 aa  461  9.999999999999999e-129  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_0609  putative acyl-CoA dehydrogenase  45.14 
 
 
592 aa  460  9.999999999999999e-129  Pseudomonas aeruginosa PA7  Bacteria  normal  0.666513  n/a   
 
 
-
 
NC_008463  PA14_06640  putative acyl-CoA dehydrogenase  45.32 
 
 
592 aa  459  9.999999999999999e-129  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2750  acyl-CoA dehydrogenase domain-containing protein  43.33 
 
 
599 aa  456  1e-127  Marinobacter aquaeolei VT8  Bacteria  unclonable  0.000084613  n/a   
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  46.72 
 
 
591 aa  457  1e-127  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2744  acyl-CoA dehydrogenase domain-containing protein  45.54 
 
 
596 aa  457  1e-127  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>