51 homologs were found in PanDaTox collection
for query gene Msil_2797 on replicon NC_011666
Organism: Methylocella silvestris BL2



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 		 485 aa  951    Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  52.38 
 
 		 437 aa  422  1e-117  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  53.81 
 
 		 477 aa  421  1e-116  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  53.44 
 
 		 468 aa  418  9.999999999999999e-116  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  34.59 
 
 		 443 aa  225  1e-57  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  36.85 
 
 		 441 aa  222  9.999999999999999e-57  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  35.26 
 
 		 433 aa  211  2e-53  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  34.76 
 
 		 440 aa  209  1e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  35.68 
 
 		 442 aa  196  6e-49  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  32.45 
 
 		 480 aa  196  9e-49  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  31.66 
 
 		 480 aa  195  2e-48  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  32.74 
 
 		 448 aa  193  6e-48  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  65.47 
 
 		 179 aa  191  2e-47  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  33.76 
 
 		 423 aa  189  1e-46  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  31.67 
 
 		 462 aa  187  5e-46  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  31.94 
 
 		 486 aa  182  2e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  30.53 
 
 		 472 aa  179  1e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  32.59 
 
 		 463 aa  178  2e-43  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  33.1 
 
 		 461 aa  177  5e-43  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  29.72 
 
 		 466 aa  169  1e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  30.26 
 
 		 467 aa  165  2.0000000000000002e-39  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  32.18 
 
 		 463 aa  164  3e-39  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  28.7 
 
 		 465 aa  164  3e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  31.68 
 
 		 471 aa  163  6e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  30.56 
 
 		 453 aa  162  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  30.19 
 
 		 465 aa  160  5e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  28.57 
 
 		 469 aa  158  2e-37  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  30.08 
 
 		 474 aa  156  9e-37  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  29.03 
 
 		 469 aa  155  2e-36  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  28.87 
 
 		 453 aa  146  9e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  28.61 
 
 		 453 aa  144  3e-33  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  29.38 
 
 		 491 aa  141  1.9999999999999998e-32  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  28.12 
 
 		 467 aa  140  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  32.2 
 
 		 433 aa  137  6.0000000000000005e-31  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  30.42 
 
 		 457 aa  128  2.0000000000000002e-28  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  45.45 
 
 		 176 aa  121  3.9999999999999996e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  26.7 
 
 		 457 aa  115  2.0000000000000002e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  22.51 
 
 		 454 aa  90.1  9e-17  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  21.11 
 
 		 453 aa  85.9  0.000000000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  19.23 
 
 		 446 aa  79.3  0.0000000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011312  VSAL_I1229  putative immunogenic protein precursor  26.91 
 
 		 310 aa  56.6  0.0000009  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.144519  n/a   
 
 
-
 
NC_013093  Amir_1445  TRAP transporter solute receptor, TAXI family  26.85 
 
 		 307 aa  52.4  0.00002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_0846  TRAP transporter solute receptor TAXI family protein  27.31 
 
 		 306 aa  50.1  0.0001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.391191  normal  1 
 
 
-
 
NC_009953  Sare_1695  TRAP transporter solute receptor TAXI family protein  24.83 
 
 		 315 aa  49.7  0.0001  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000228802 
 
 
-
 
NC_008254  Meso_4067  TRAP transporter solute receptor TAXI family protein  25.35 
 
 		 318 aa  46.6  0.0009  Chelativorans sp. BNC1  Bacteria  normal  0.548232  n/a   
 
 
-
 
NC_009429  Rsph17025_3267  hypothetical protein  30.69 
 
 		 323 aa  46.2  0.001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.743942 
 
 
-
 
NC_013946  Mrub_2391  TAXI family TRAP transporter solute receptor  27.19 
 
 		 333 aa  46.6  0.001  Meiothermus ruber DSM 1279  Bacteria  decreased coverage  0.0000115458  normal  0.82394 
 
 
-
 
NC_009783  VIBHAR_00793  hypothetical protein  23.22 
 
 		 322 aa  45.1  0.003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_3723  TRAP transporter solute receptor TAXI family protein  22.5 
 
 		 316 aa  45.1  0.003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013456  VEA_001678  TRAP transporter solute receptor TAXI family precursor  23.47 
 
 		 322 aa  44.3  0.004  Vibrio sp. Ex25  Bacteria  normal  0.150837  n/a   
 
 
-
 
NC_013093  Amir_5695  TRAP transporter solute receptor, TAXI family  24.32 
 
 		 308 aa  43.9  0.006  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
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