Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_2929 |
Symbol | |
ID | 3566197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 3155467 |
End bp | 3156798 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637681398 |
Product | hypothetical protein |
Protein accession | YP_286129 |
Protein GI | 71908542 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 0.0484025 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTT CTGCTAGACG ACTGCTTGGC TCAAGGCCTG TCTGGGTTAA GCAGTTGTTT CTCGGAATGA TGATTGTTCT GGGTATTGGT GCCATTGGCA CGCTGGTCAT CAAGCAGGGT TTGGTCCGCT GGCCGCTGAA AGTGGCGACT GGACCCGCCA TGATTGGCGG TGCGGACTTC CTGAATACGA TCACAAAGGT ATTCGCTGAA GAACGTCCGA TCATTCATCT GAAGCGCATC AAGAAAGAGA GTTTCGCTGC CAGCGCCAAG GCCCTGGAAA ACGGGGAAGC CGATCTTGCT ATCGTCCGCA GCGATATCGC GATGCCGAGC AACGGACTGA CGATTGCAGT TCTCCGTCGT GACAATCTGG TGCTGATCGT GCCGGGAAAC GCTAGCCTGA GCAGTTTTCA GGGGCTGTCA GGCCAGAAAA TCGGCTTGCT CAAGTCGGAT TCAGCGGAGC GCAATGAAAG TCTGGTGCGG CTGCTGAATG GCGTTCTGAA TTTTTATAAT ATCAACCCCG AAACGGTTCA TCAGGAATTA CTGACGCTGG ATGAAATTGG TCCGGCCATC GCAAAAAAAC AAGTGGCCGG CATTCTTGCG CTTGGTCCAT CGGGCACCGG CCCGGTTAGC AAGGCCATCG CCGCAATCGG CAGTGCATCC AAAACCTCAC CAAAGTTGAT TGGCGAAAAA CAGGCGGCTG CCATTGCCAA AACAATCCAG GGTACAGAGG CCAACGAAAT CGAAGAGGGC GATTTTGGCG GAGCGAAACC GAAGCCGGAG GAGGCGCTGG AGACCTTGGC CGTCACCTTT CGCCTGGTTG GACGGCACTC GCTGCCCGAC TTTGCCACGG GTGAAATTGC ACGCCTGCTC ACCCTGACCA AGGCACGCCT GATCTCAACC TCTCCTCTGG CCCGGAACAT CGAGGCTCCG GATAGCGACG ATGGCTCCGG CTTGCCTATC CATCCCGGGG CTGCCGCGTA TTTCGAGGGG GAGCAAAACT CACTGGTCGA CAGCGCCGTG AGCATCTTCT ATTTGATATC GATTATTCTG GGTATTCTTG GCTCGTGCAT CGTCTGGTTG TTCAGTGCAA GAAAGTCCGA CTCAGCGACA GGCGGTGGCA TTGATATCGA GCGACTGGTG AGCATCATGC GCAACGCTCG AAATGCCAAT TTGACACTTC TTGATCGGCT GGACGATGAG CTATCCGACC TTGTTATCCG ATCGTTTGAT CAAGGCAAGG TACCCGATGC GGAGCAGATC GGCATCATCG CAATCGTCAC CCGACAACTC GACCTGAGAC GCCAAAGACT TCAGGCTCAT CCACCCGTTT GA
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Protein sequence | MIRSARRLLG SRPVWVKQLF LGMMIVLGIG AIGTLVIKQG LVRWPLKVAT GPAMIGGADF LNTITKVFAE ERPIIHLKRI KKESFAASAK ALENGEADLA IVRSDIAMPS NGLTIAVLRR DNLVLIVPGN ASLSSFQGLS GQKIGLLKSD SAERNESLVR LLNGVLNFYN INPETVHQEL LTLDEIGPAI AKKQVAGILA LGPSGTGPVS KAIAAIGSAS KTSPKLIGEK QAAAIAKTIQ GTEANEIEEG DFGGAKPKPE EALETLAVTF RLVGRHSLPD FATGEIARLL TLTKARLIST SPLARNIEAP DSDDGSGLPI HPGAAAYFEG EQNSLVDSAV SIFYLISIIL GILGSCIVWL FSARKSDSAT GGGIDIERLV SIMRNARNAN LTLLDRLDDE LSDLVIRSFD QGKVPDAEQI GIIAIVTRQL DLRRQRLQAH PPV
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