42 homologs were found in PanDaTox collection
for query gene Daro_2929 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007298  Daro_2929  hypothetical protein  100 
 
 		 443 aa  880    Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  34.01 
 
 		 437 aa  231  2e-59  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  37.91 
 
 		 433 aa  230  4e-59  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  36.75 
 
 		 485 aa  222  8e-57  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  34.07 
 
 		 477 aa  206  6e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  34.07 
 
 		 468 aa  206  8e-52  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  33.82 
 
 		 441 aa  187  2e-46  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  33.04 
 
 		 423 aa  169  7e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  27.19 
 
 		 462 aa  167  2.9999999999999998e-40  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  34.6 
 
 		 440 aa  167  4e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  31.04 
 
 		 486 aa  164  4.0000000000000004e-39  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  27.3 
 
 		 480 aa  161  2e-38  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  32.33 
 
 		 442 aa  157  5.0000000000000005e-37  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  31.27 
 
 		 461 aa  156  6e-37  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  29.19 
 
 		 469 aa  156  7e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  29.19 
 
 		 474 aa  155  1e-36  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  26.94 
 
 		 480 aa  155  1e-36  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  27.92 
 
 		 469 aa  151  2e-35  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  29.87 
 
 		 448 aa  148  2.0000000000000003e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  29.01 
 
 		 463 aa  142  9.999999999999999e-33  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  30.97 
 
 		 463 aa  139  8.999999999999999e-32  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  28.12 
 
 		 453 aa  137  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  24.75 
 
 		 465 aa  137  5e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  25.19 
 
 		 467 aa  137  5e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  27.96 
 
 		 472 aa  135  9.999999999999999e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  26.15 
 
 		 466 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  32.78 
 
 		 453 aa  134  5e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  32.45 
 
 		 453 aa  129  1.0000000000000001e-28  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  27.33 
 
 		 471 aa  126  8.000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  26.02 
 
 		 433 aa  120  7e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  28.36 
 
 		 457 aa  116  6.9999999999999995e-25  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  26.58 
 
 		 465 aa  113  7.000000000000001e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  25.24 
 
 		 491 aa  106  8e-22  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  28.07 
 
 		 457 aa  105  1e-21  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  23.91 
 
 		 467 aa  100  4e-20  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  35.71 
 
 		 179 aa  94.4  4e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  23.71 
 
 		 446 aa  82  0.00000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  31.65 
 
 		 176 aa  78.6  0.0000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  23.02 
 
 		 454 aa  74.3  0.000000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  22.53 
 
 		 453 aa  60.1  0.00000008  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_009953  Sare_1695  TRAP transporter solute receptor TAXI family protein  22.26 
 
 		 315 aa  50.1  0.00009  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000228802 
 
 
-
 
NC_009380  Strop_1697  TRAP transporter solute receptor TAXI family protein  22.22 
 
 		 330 aa  46.6  0.0008  Salinispora tropica CNB-440  Bacteria  normal  0.607751  normal  0.828936 
 
 
-
 
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