46 homologs were found in PanDaTox collection
for query gene Mrad2831_5881 on replicon NC_010510
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 		 440 aa  857    Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  34.76 
 
 		 485 aa  218  2e-55  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  32.78 
 
 		 437 aa  211  2e-53  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  37.47 
 
 		 468 aa  209  8e-53  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  35.15 
 
 		 477 aa  208  2e-52  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  34.94 
 
 		 433 aa  175  1.9999999999999998e-42  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  31.78 
 
 		 443 aa  172  6.999999999999999e-42  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  27.79 
 
 		 486 aa  167  5e-40  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  28.24 
 
 		 448 aa  166  1.0000000000000001e-39  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  27.79 
 
 		 480 aa  164  3e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  26.26 
 
 		 480 aa  156  8e-37  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  31.76 
 
 		 441 aa  155  2e-36  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  25.8 
 
 		 462 aa  144  3e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  33.33 
 
 		 423 aa  143  5e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  31.97 
 
 		 461 aa  142  9.999999999999999e-33  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  30.11 
 
 		 465 aa  132  9e-30  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  27.93 
 
 		 466 aa  131  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  30.48 
 
 		 442 aa  129  7.000000000000001e-29  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  28.64 
 
 		 467 aa  129  8.000000000000001e-29  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  27.29 
 
 		 491 aa  117  3.9999999999999997e-25  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  27.57 
 
 		 463 aa  116  8.999999999999998e-25  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  29.5 
 
 		 465 aa  114  2.0000000000000002e-24  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  26.99 
 
 		 471 aa  106  8e-22  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  26.22 
 
 		 469 aa  105  1e-21  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  26.45 
 
 		 469 aa  106  1e-21  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  24.45 
 
 		 467 aa  105  2e-21  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  26.22 
 
 		 474 aa  105  2e-21  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  42.75 
 
 		 179 aa  102  1e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  27.89 
 
 		 472 aa  102  1e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  26 
 
 		 463 aa  101  2e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  26.98 
 
 		 453 aa  101  3e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  26.28 
 
 		 453 aa  100  7e-20  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  26.28 
 
 		 453 aa  98.6  2e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  22.94 
 
 		 433 aa  98.2  3e-19  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  23.87 
 
 		 446 aa  93.2  8e-18  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  24.93 
 
 		 454 aa  93.2  9e-18  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  28.22 
 
 		 457 aa  88.6  2e-16  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  27.9 
 
 		 457 aa  84  0.000000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  39.42 
 
 		 176 aa  64.7  0.000000003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  24.79 
 
 		 453 aa  61.2  0.00000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_011312  VSAL_I1229  putative immunogenic protein precursor  28.57 
 
 		 310 aa  57.4  0.0000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.144519  n/a   
 
 
-
 
NC_009429  Rsph17025_3267  hypothetical protein  35.92 
 
 		 323 aa  54.7  0.000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.743942 
 
 
-
 
NC_009380  Strop_1697  TRAP transporter solute receptor TAXI family protein  27.89 
 
 		 330 aa  52.4  0.00001  Salinispora tropica CNB-440  Bacteria  normal  0.607751  normal  0.828936 
 
 
-
 
NC_009953  Sare_1695  TRAP transporter solute receptor TAXI family protein  25.42 
 
 		 315 aa  51.6  0.00002  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000228802 
 
 
-
 
NC_013093  Amir_1445  TRAP transporter solute receptor, TAXI family  28.65 
 
 		 307 aa  43.5  0.008  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_3213  TRAP transporter solute receptor TAXI family protein  22.78 
 
 		 325 aa  43.1  0.009  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
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