46 homologs were found in PanDaTox collection
for query gene Mnod_5694 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 		 477 aa  942    Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  82.43 
 
 		 468 aa  734    Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  57.81 
 
 		 437 aa  494  9.999999999999999e-139  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  54.09 
 
 		 485 aa  426  1e-118  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  95.71 
 
 		 179 aa  268  1e-70  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  35.26 
 
 		 433 aa  219  6e-56  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  34.46 
 
 		 441 aa  214  1.9999999999999998e-54  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  32.82 
 
 		 443 aa  212  1e-53  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  36.87 
 
 		 440 aa  207  4e-52  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  33.33 
 
 		 442 aa  193  6e-48  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  31.3 
 
 		 423 aa  181  4e-44  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  32.04 
 
 		 461 aa  177  4e-43  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  31.39 
 
 		 486 aa  171  2e-41  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  29.48 
 
 		 462 aa  164  3e-39  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  29.05 
 
 		 480 aa  163  6e-39  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_2418  TRAP-type uncharacterized transport system periplasmic component-like protein  54.61 
 
 		 176 aa  162  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  29.12 
 
 		 480 aa  160  4e-38  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  28.9 
 
 		 448 aa  160  5e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  30.48 
 
 		 465 aa  159  1e-37  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  26.93 
 
 		 466 aa  150  6e-35  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  29.6 
 
 		 467 aa  149  9e-35  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  29.41 
 
 		 465 aa  143  6e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  26.43 
 
 		 469 aa  143  6e-33  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  29.53 
 
 		 467 aa  140  3.9999999999999997e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  26.64 
 
 		 469 aa  137  4e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  26.64 
 
 		 474 aa  137  5e-31  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  28.98 
 
 		 463 aa  136  9.999999999999999e-31  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  28.67 
 
 		 491 aa  132  2.0000000000000002e-29  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  27 
 
 		 471 aa  130  6e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  27.6 
 
 		 463 aa  128  2.0000000000000002e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  26.91 
 
 		 453 aa  128  3e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  26.09 
 
 		 472 aa  128  3e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  24.83 
 
 		 433 aa  121  1.9999999999999998e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  26.8 
 
 		 453 aa  120  3.9999999999999996e-26  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  26.8 
 
 		 453 aa  120  7.999999999999999e-26  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  27.17 
 
 		 457 aa  108  3e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  27.41 
 
 		 457 aa  107  4e-22  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  22.94 
 
 		 454 aa  88.2  3e-16  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  22.28 
 
 		 453 aa  70.1  0.00000000009  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_011729  PCC7424_4573  TRAP transporter solute receptor, TAXI family  20.59 
 
 		 446 aa  67.4  0.0000000005  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_009380  Strop_1697  TRAP transporter solute receptor TAXI family protein  24.11 
 
 		 330 aa  62.8  0.00000001  Salinispora tropica CNB-440  Bacteria  normal  0.607751  normal  0.828936 
 
 
-
 
NC_009953  Sare_1695  TRAP transporter solute receptor TAXI family protein  24.91 
 
 		 315 aa  61.2  0.00000004  Salinispora arenicola CNS-205  Bacteria  normal  1  decreased coverage  0.000228802 
 
 
-
 
NC_013093  Amir_1445  TRAP transporter solute receptor, TAXI family  30.43 
 
 		 307 aa  58.9  0.0000002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I1229  putative immunogenic protein precursor  22.48 
 
 		 310 aa  51.6  0.00003  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.144519  n/a   
 
 
-
 
NC_010506  Swoo_0846  TRAP transporter solute receptor TAXI family protein  23.61 
 
 		 306 aa  44.7  0.004  Shewanella woodyi ATCC 51908  Bacteria  normal  0.391191  normal  1 
 
 
-
 
NC_008709  Ping_2594  TRAP transporter solute receptor, TAXI family protein  21.53 
 
 		 310 aa  43.1  0.01  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  0.323017 
 
 
-
 
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