40 homologs were found in PanDaTox collection
for query gene Mnod_3511 on replicon NC_011894
Organism: Methylobacterium nodulans ORS 2060



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011894  Mnod_3511  TRAP-type uncharacterized transport system periplasmic component-like protein  100 
 
 		 179 aa  358  2e-98  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_1545  TRAP-type uncharacterized transport system periplasmic component-like protein  90 
 
 		 468 aa  270  9e-72  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_5694  TRAP-type uncharacterized transport system periplasmic component-like protein  95.71 
 
 		 477 aa  268  2e-71  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010581  Bind_0899  hypothetical protein  68.21 
 
 		 437 aa  218  5e-56  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.727607  normal  0.541745 
 
 
-
 
NC_011666  Msil_2797  TRAP-type uncharacterized transport system periplasmic component-like protein  63.58 
 
 		 485 aa  197  5e-50  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011666  Msil_3025  TRAP transporter solute receptor, TAXI family  39.74 
 
 		 441 aa  110  9e-24  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010581  Bind_2753  hypothetical protein  37.24 
 
 		 433 aa  106  2e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010510  Mrad2831_5881  TRAP-type uncharacterized transport system periplasmic component-like protein  42.64 
 
 		 440 aa  100  1e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.810377 
 
 
-
 
NC_007298  Daro_2929  hypothetical protein  36.36 
 
 		 443 aa  97.1  1e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.0484025  normal  1 
 
 
-
 
NC_010581  Bind_3430  TRAP transporter solute receptor TAXI family protein  36.69 
 
 		 461 aa  94.7  6e-19  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  1  normal  0.199051 
 
 
-
 
NC_011894  Mnod_0342  TRAP transporter solute receptor, TAXI family  35.07 
 
 		 423 aa  93.6  1e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0450847  n/a   
 
 
-
 
NC_009485  BBta_0249  hypothetical protein  32.19 
 
 		 448 aa  94  1e-18  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_2525  TRAP transporter solute receptor TAXI family protein  31.91 
 
 		 486 aa  88.6  4e-17  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.839724  normal  0.154925 
 
 
-
 
NC_010511  M446_2265  TRAP transporter solute receptor TAXI family protein  36.59 
 
 		 442 aa  88.2  6e-17  Methylobacterium sp. 4-46  Bacteria  normal  1  decreased coverage  0.00194673 
 
 
-
 
NC_007778  RPB_0100  TRAP transporter solute receptor TAXI family protein  31.58 
 
 		 480 aa  85.1  5e-16  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007958  RPD_1959  hypothetical protein  32.59 
 
 		 467 aa  84.3  8e-16  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007964  Nham_0909  hypothetical protein  32.59 
 
 		 491 aa  84  0.000000000000001  Nitrobacter hamburgensis X14  Bacteria  normal  1  n/a   
 
 
-
 
NC_007778  RPB_3495  hypothetical protein  31.85 
 
 		 465 aa  82.8  0.000000000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011004  Rpal_0409  TRAP transporter solute receptor, TAXI family  30.38 
 
 		 462 aa  80.9  0.000000000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.309942  n/a   
 
 
-
 
NC_007958  RPD_0702  TRAP transporter solute receptor TAXI family protein  30.6 
 
 		 480 aa  79  0.00000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.871087  normal  1 
 
 
-
 
NC_011004  Rpal_2087  hypothetical protein  31.11 
 
 		 466 aa  79  0.00000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.073016  n/a   
 
 
-
 
NC_010505  Mrad2831_3542  TRAP-type uncharacterized transport system periplasmic component-like protein  28.47 
 
 		 472 aa  76.3  0.0000000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.919124 
 
 
-
 
NC_011894  Mnod_0107  TRAP-type uncharacterized transport system periplasmic component-like protein  29.27 
 
 		 453 aa  73.9  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0519  TRAP-type uncharacterized transport system periplasmic component-like protein  28 
 
 		 463 aa  70.9  0.000000000009  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_2036  TRAP-type uncharacterized transport system periplasmic component-like protein  30 
 
 		 463 aa  70.5  0.00000000001  Methylobacterium sp. 4-46  Bacteria  normal  1  hitchhiker  0.00372211 
 
 
-
 
NC_010505  Mrad2831_5654  TRAP-type uncharacterized transport system periplasmic component-like protein  27.87 
 
 		 471 aa  68.9  0.00000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009485  BBta_6537  hypothetical protein  29.86 
 
 		 467 aa  68.2  0.00000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.866176  normal  1 
 
 
-
 
NC_010511  M446_1581  TRAP transporter solute receptor TAXI family protein  28.93 
 
 		 457 aa  67  0.0000000001  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.193293 
 
 
-
 
NC_011666  Msil_2760  TRAP transporter solute receptor, TAXI family  26.35 
 
 		 433 aa  65.9  0.0000000003  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_011757  Mchl_2577  TRAP-type uncharacterized transport system periplasmic component-like protein  27.2 
 
 		 469 aa  64.7  0.0000000007  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.301233 
 
 
-
 
NC_010172  Mext_2302  TRAP-type uncharacterized transport system periplasmic component-like protein  27.2 
 
 		 474 aa  64.7  0.0000000008  Methylobacterium extorquens PA1  Bacteria  normal  0.172272  hitchhiker  0.00762339 
 
 
-
 
NC_011757  Mchl_0184  TRAP-type uncharacterized transport system periplasmic component-like protein  25.52 
 
 		 453 aa  63.9  0.000000001  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.864216  normal  0.611675 
 
 
-
 
NC_010725  Mpop_2259  TRAP-type uncharacterized transport system periplasmic component-like protein  27.2 
 
 		 469 aa  63.2  0.000000002  Methylobacterium populi BJ001  Bacteria  normal  0.466386  normal  0.36502 
 
 
-
 
NC_010172  Mext_0239  TRAP-type uncharacterized transport system periplasmic component-like protein  25.52 
 
 		 453 aa  63.5  0.000000002  Methylobacterium extorquens PA1  Bacteria  normal  0.264256  normal  1 
 
 
-
 
NC_010505  Mrad2831_4219  TRAP-type uncharacterized transport system periplasmic component-like protein  26.71 
 
 		 465 aa  60.1  0.00000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.340628 
 
 
-
 
NC_010511  M446_4743  TRAP-type uncharacterized transport system periplasmic component-like protein  24.8 
 
 		 457 aa  52.8  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  0.704005  normal  1 
 
 
-
 
NC_011884  Cyan7425_4331  TRAP transporter solute receptor, TAXI family  26.23 
 
 		 453 aa  52.8  0.000003  Cyanothece sp. PCC 7425  Bacteria  normal  0.794472  normal  1 
 
 
-
 
NC_013093  Amir_1445  TRAP transporter solute receptor, TAXI family  33.7 
 
 		 307 aa  47.8  0.00009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_4597  TRAP transporter solute receptor, TAXI family  26.32 
 
 		 454 aa  47  0.0002  Cyanothece sp. PCC 7425  Bacteria  normal  0.244351  normal  1 
 
 
-
 
NC_009429  Rsph17025_3267  hypothetical protein  28.71 
 
 		 323 aa  44.7  0.0008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.743942 
 
 
-
 
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