31 homologs were found in PanDaTox collection
for query gene Lferr_0147 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011206  Lferr_0147  transcriptional regulator, TetR family  100 
 
 		 217 aa  436  1e-121  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012792  Vapar_5659  regulatory protein TetR  25.99 
 
 		 221 aa  61.2  0.00000001  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_4274  transcriptional regulator, TetR family  26.67 
 
 		 220 aa  57.8  0.0000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_4608  TetR family transcriptional regulator  35.56 
 
 		 206 aa  49.3  0.00005  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.198377  normal  1 
 
 
-
 
NC_011894  Mnod_0737  transcriptional regulator, TetR family  34.09 
 
 		 209 aa  48.1  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_0873  TetR family transcriptional regulator  33.78 
 
 		 196 aa  46.6  0.0003  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.682179 
 
 
-
 
NC_009077  Mjls_0987  TetR family transcriptional regulator  38.36 
 
 		 203 aa  45.8  0.0005  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_1434  transcriptional regulator, TetR family  34.29 
 
 		 225 aa  45.4  0.0006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.185065  normal  0.789444 
 
 
-
 
NC_009720  Xaut_0455  TetR family transcriptional regulator  37.65 
 
 		 224 aa  45.4  0.0006  Xanthobacter autotrophicus Py2  Bacteria  normal  0.366206  normal  0.106872 
 
 
-
 
NC_013165  Shel_23110  transcriptional regulator  53.85 
 
 		 203 aa  45.1  0.0008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012854  Rleg_6328  transcriptional regulator, TetR family  29.51 
 
 		 199 aa  45.1  0.0009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00138827  normal  1 
 
 
-
 
NC_013440  Hoch_0040  transcriptional regulator, TetR family  25.81 
 
 		 225 aa  44.3  0.001  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_4456  regulatory protein TetR  26.13 
 
 		 202 aa  44.7  0.001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0166479  n/a   
 
 
-
 
NC_009943  Dole_1218  TetR family transcriptional regulator  34.48 
 
 		 206 aa  44.7  0.001  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_009484  Acry_0512  TetR family transcriptional regulator  37.29 
 
 		 201 aa  44.3  0.001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A1987  TetR family transcriptional regulator  32.88 
 
 		 211 aa  44.7  0.001  Ralstonia eutropha JMP134  Bacteria  normal  0.15936  n/a   
 
 
-
 
NC_013093  Amir_0661  transcriptional regulator, TetR family  28.77 
 
 		 205 aa  43.9  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2548  TetR family transcriptional regulator  33.8 
 
 		 236 aa  43.5  0.003  Anabaena variabilis ATCC 29413  Bacteria  decreased coverage  0.00000000944763  normal  1 
 
 
-
 
NC_010335  Caul_5150  TetR family transcriptional regulator  32.05 
 
 		 204 aa  42.7  0.004  Caulobacter sp. K31  Bacteria  normal  0.491017  normal  1 
 
 
-
 
NC_008726  Mvan_4778  TetR family transcriptional regulator  28.69 
 
 		 217 aa  43.1  0.004  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_0429  TetR family transcriptional regulator  40.68 
 
 		 213 aa  42.7  0.005  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.0148562 
 
 
-
 
NC_010725  Mpop_4859  transcriptional regulator, TetR family  32.08 
 
 		 186 aa  42.4  0.005  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.205859 
 
 
-
 
NC_009972  Haur_3161  TetR family transcriptional regulator  32.67 
 
 		 195 aa  42.4  0.005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.000174477  n/a   
 
 
-
 
NC_013595  Sros_3962  putative transcriptional regulator, TetR family  31.88 
 
 		 194 aa  42.4  0.005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.545183  normal  0.218359 
 
 
-
 
NC_007333  Tfu_0412  TetR family transcriptional regulator  29.73 
 
 		 216 aa  42  0.007  Thermobifida fusca YX  Bacteria  normal  0.742667  n/a   
 
 
-
 
NC_009565  TBFG_10458  transcriptional regulator  25.26 
 
 		 253 aa  42  0.007  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_13360  transcriptional regulator, TetR family  25 
 
 		 215 aa  41.6  0.008  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0417905  n/a   
 
 
-
 
NC_013595  Sros_3836  putative transcriptional regulator, TetR family  29.07 
 
 		 179 aa  41.6  0.009  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0612117 
 
 
-
 
NC_014210  Ndas_3992  transcriptional regulator, TetR family  29.09 
 
 		 218 aa  41.6  0.009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_1592  transcriptional regulator, TetR family  26.16 
 
 		 198 aa  41.6  0.01  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8111  putative transcriptional regulator, TetR family  38.57 
 
 		 168 aa  41.6  0.01  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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