Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0873 |
Symbol | |
ID | 5154809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 906090 |
End bp | 906680 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640555870 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001237040 |
Protein GI | 148252455 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.682179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGACGA AACCACAAGA GCGCAGCCGC AAGCCGCGCG CCGATGCCCA GCGCAATCGC GAGCGCGTGC TGGAGGCGGC CAAGGCGGTG TTCAGCGTCG GCGGCGCCGA GGCGAGCCTG GAGGCCGTGG CGCGCCAGGC CGGTGTCGGC ATCGGCACGC TGTACCGGCA TTTCCCCACC CGCGAGGACC TGTTCGAGGC GGTGTATCGC CGCGAGGTCG AGCAGCTCTC GGAGCTGGCC GAGGCGCTGA AGAGCGAGCC GTCTCCGGTC GAGGCGCTTC GGCGCTGGCT ACGCTCGACG GTGCAGTTCG TCGCCACCAA GAAGGGCATG ATGGCGGCGC TGGCGATCGT GATGAACGCG AACTCCGAAC TCGCCGCTTA TTCGCATGGC CATCTCACCC GCTCGATCGG GGCCTTGCTC GCCCGCGCCG TCGAGGCCGG CGAGATCCGC AGCGACATCA GCGCCGACGA CGTCCTCCGC GCCCTGATCG GCATGTGCTA CATGCACGAC CAGACCGGCT GGCAGCAGAG CGTGCTGCGG CTGCTCGATG TGTTCGTGGA TGGGCTAAGG GTCGGGAAGG CGCAGGTGTG A
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Protein sequence | METKPQERSR KPRADAQRNR ERVLEAAKAV FSVGGAEASL EAVARQAGVG IGTLYRHFPT REDLFEAVYR REVEQLSELA EALKSEPSPV EALRRWLRST VQFVATKKGM MAALAIVMNA NSELAAYSHG HLTRSIGALL ARAVEAGEIR SDISADDVLR ALIGMCYMHD QTGWQQSVLR LLDVFVDGLR VGKAQV
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