Gene Dole_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1218 
Symbol 
ID5694052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1452751 
End bp1453371 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content57% 
IMG OID641263811 
ProductTetR family transcriptional regulator 
Protein accessionYP_001529101 
Protein GI158521231 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAAAC GCCCCAGTCG AAAAGAGCGA AAAAAGCTGA TTGTCCAGGC GGCGGCCGAG 
GTGTTTGCCG AAAAGGGGTA CAACAAGACC CTGGTGGCCG AGGTGGCCGT GGCCGCGGGC 
ATCGGCAAGG GCACGGTGTA TGAATATTTT AAGAGCAAAG ACGACCTGTT TTTCGCGGTG 
TTTCAGTATG TGGTCCAGGA AAGCGGCGAC ACCGCTGAAG CGGCCCTGGA AAAAGCGGCC 
GGCAAAACCG CGGCCCTTCG GCTGACGGCC CTTAACAGCG CCATTGTCTC ATGGATCGTG 
CAGCACCGGC ACCTTTACAC CCTGAGCATG GAGTTCTGGG CCGCCACGGT ATCGGCCTCG 
CCGGAGATGC GGGTCCGGAT GGAAAAAGAG TTCAAAAATA TTTACGAAAG GTTCCGCCGG 
ATCGTGGGCG GCATTATTCA GGAAGGCGTG GCCGGCGGCG TATTCAAAAA AAGCATCAAC 
TCCAAGGCCA TTGCCGCGGC CGTTGTGGGA TCGTGGGACG GCCTGGGGGT GCAGGCCTGG 
TTTGACCCGG AGTTTAAAAT TGAAAAGACA TCCAGAACCT ACATGGAGCT GCTGATCAAC 
GGCATGCTGG CAGAAAACTG A
 
Protein sequence
MTKRPSRKER KKLIVQAAAE VFAEKGYNKT LVAEVAVAAG IGKGTVYEYF KSKDDLFFAV 
FQYVVQESGD TAEAALEKAA GKTAALRLTA LNSAIVSWIV QHRHLYTLSM EFWAATVSAS 
PEMRVRMEKE FKNIYERFRR IVGGIIQEGV AGGVFKKSIN SKAIAAAVVG SWDGLGVQAW 
FDPEFKIEKT SRTYMELLIN GMLAEN