Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1218 |
Symbol | |
ID | 5694052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1452751 |
End bp | 1453371 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641263811 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001529101 |
Protein GI | 158521231 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAAC GCCCCAGTCG AAAAGAGCGA AAAAAGCTGA TTGTCCAGGC GGCGGCCGAG GTGTTTGCCG AAAAGGGGTA CAACAAGACC CTGGTGGCCG AGGTGGCCGT GGCCGCGGGC ATCGGCAAGG GCACGGTGTA TGAATATTTT AAGAGCAAAG ACGACCTGTT TTTCGCGGTG TTTCAGTATG TGGTCCAGGA AAGCGGCGAC ACCGCTGAAG CGGCCCTGGA AAAAGCGGCC GGCAAAACCG CGGCCCTTCG GCTGACGGCC CTTAACAGCG CCATTGTCTC ATGGATCGTG CAGCACCGGC ACCTTTACAC CCTGAGCATG GAGTTCTGGG CCGCCACGGT ATCGGCCTCG CCGGAGATGC GGGTCCGGAT GGAAAAAGAG TTCAAAAATA TTTACGAAAG GTTCCGCCGG ATCGTGGGCG GCATTATTCA GGAAGGCGTG GCCGGCGGCG TATTCAAAAA AAGCATCAAC TCCAAGGCCA TTGCCGCGGC CGTTGTGGGA TCGTGGGACG GCCTGGGGGT GCAGGCCTGG TTTGACCCGG AGTTTAAAAT TGAAAAGACA TCCAGAACCT ACATGGAGCT GCTGATCAAC GGCATGCTGG CAGAAAACTG A
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Protein sequence | MTKRPSRKER KKLIVQAAAE VFAEKGYNKT LVAEVAVAAG IGKGTVYEYF KSKDDLFFAV FQYVVQESGD TAEAALEKAA GKTAALRLTA LNSAIVSWIV QHRHLYTLSM EFWAATVSAS PEMRVRMEKE FKNIYERFRR IVGGIIQEGV AGGVFKKSIN SKAIAAAVVG SWDGLGVQAW FDPEFKIEKT SRTYMELLIN GMLAEN
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