Gene Amir_0661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0661 
Symbol 
ID8324823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp730614 
End bp731231 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID644941204 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003098470 
Protein GI256374810 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAGCCC CAAGGGTTCG GATGACGGGC AAGGAGCGGC GCGAGCAGCT GCTCGACGTG 
GCGCGCGCAC TGTTCGCGGA GAAGGGCTAC GAGGTCGCCT CGGTCGAGGA GATCGCGCAC 
CGCGCGGGCG TGAGCAAGCC CGTGGTGTAC GAGCACTTCG GCGGCAAGGA GGGCATCTAC 
GCCGTCGTGG TCGACCGGGA GATGCAGTCG CTGATGGACC ACGTGGTCAA CGCGCTCTCC 
GGGGGGCACC CCAGGGAGCT GCTGGAGCAG GCGGCCTGCG CGCTGCTGGA CTACATCGAG 
GGGTCGACGG ACGGGTTCCG CATCCTGGTC CGCGACTCGC CGGTCGCGTC GACCACCGGC 
ACGTTCTCGT CGCTGCTCAA CGACATCGCC TCGCAGGTCG AGCACATCCT GGGGCTGCAC 
TTCTCCCGGC AGGGCTACGA CCGGAAGCTG GCCGCGCTGT ACTCCCAGGC GCTGGTGGGG 
ATGGTCGCGC TGACCGGGCA GTGGTGGCTG GAGGTGCGCA AGCCGAAGAA GGACGAGGTG 
GCCGCGCACC TGGTCAACCT GGCCTGGAAG GGGCTGTCGA GCCTGGAGCA CAAGCCCAAG 
CTGCGCAACC GGCCGTGA
 
Protein sequence
MPAPRVRMTG KERREQLLDV ARALFAEKGY EVASVEEIAH RAGVSKPVVY EHFGGKEGIY 
AVVVDREMQS LMDHVVNALS GGHPRELLEQ AACALLDYIE GSTDGFRILV RDSPVASTTG 
TFSSLLNDIA SQVEHILGLH FSRQGYDRKL AALYSQALVG MVALTGQWWL EVRKPKKDEV 
AAHLVNLAWK GLSSLEHKPK LRNRP