Gene Haur_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_3161 
Symbol 
ID5735033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3990674 
End bp3991261 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content53% 
IMG OID641280304 
ProductTetR family transcriptional regulator 
Protein accessionYP_001545926 
Protein GI159899679 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000174477 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACGCA CCGCCGATCC GCACCGCCGC GAAGCAATTC TCCGCGCTGC CCGCGAAATT 
TTTATGGAAC AAGGCTATAC CAAAGCCCGC ATGCTCGATA TTGCCGCCCG CGCCGAGATG 
GCTACTGGCA CGCTTTATCT TTATTTTGAT TCTAAGCAAA CCCTCGCCAT GGCGCTGGCT 
GATTCCGTTT TAGAGGGTTT GACCGAGGTG ATTTTGCCGA TTTTGGCGCT TGAATCAACC 
CCAACCATGA TTCGCGCATG CGTGCAAACG GCGATTCGCT TTTCGCTGCA ACATACCGAT 
TTATTTCGCT TGTTGGGGCT AGAAGCTGGC TTGAGTATCG AGGTTGAACA CCAACAGCCT 
GCTCGCCTCC GTTTGCACGC CCTGCTGGCC GAAGCACTAG CTCAACGCAT GCAGCAAGGC 
ACAATCTATA CCTATCAACC ACTGGCTTTG GCCGAAATTC TGGCGGGCTT GATTGAATGG 
GTTGTGACCA TGGCCATGAT TCGCGGTGAA AGCGATGTCA GCCATTACGA ACCAACCTTA 
TTGCAATTTA TTGAGCAGGC CTTACTACCA CCAAACCCAA CCCACTAA
 
Protein sequence
MARTADPHRR EAILRAAREI FMEQGYTKAR MLDIAARAEM ATGTLYLYFD SKQTLAMALA 
DSVLEGLTEV ILPILALEST PTMIRACVQT AIRFSLQHTD LFRLLGLEAG LSIEVEHQQP 
ARLRLHALLA EALAQRMQQG TIYTYQPLAL AEILAGLIEW VVTMAMIRGE SDVSHYEPTL 
LQFIEQALLP PNPTH