| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23110 |
|---|
| Symbol | |
|---|
| ID | 8396200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 2562683 |
|---|
| End bp | 2563294 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644987058 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_003144669 |
|---|
| Protein GI | 257064997 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCG ACGGAAGCAT CAGCCGAGAG AAGATACTCG CCGCAGCTCA GGAGGAATTC
CTGGAGCGCG GCTTCGACCG CGCCTCCATC CGCAGCATCG GCCAGAGGGC TGGGCTCACC
AGCGCCGCGC TGTACCGCCA CTTCGAAAAC AAAGAGGAGA TCTTCGCATC CCTGGTGGAA
CCGGGCCTTC AAGCGATCAA CGAATGGATG GACGACCACA TGTCCCGCGC GTATGCCGAT
ATCGAGGTCG ACAAAGCGGA AGAGGCCGCC TCCCGTTCGG AGGTCGACAT GATGCGGGAC
GTGGTGTTTC CGAACCGCAC GGCATTCAAG CTCCTGCTCT GCCGCTCGCA AGGCACGGCC
CATGAGGATT TCATCCACGA CCTGGTCGAA CAGCAGCAGA AGGACCTTTC GCGGGGCTTG
GTCTGGCTGA AGAAGAAAGG CTACCCCGTA AAAGAGCCCA GCGACGAAAC GCTGCACATG
CTCATGAGCG CATACATCAC GGCGCTGTTC GAGCCCATCG CGCACGACTA CCCCGAGGAG
GATGCGATGC GGTACTACGA AGCGATAGAA CGGTTCTTCC TGCCAGGATG GCGGGAAATA
CTTGGAATCT AA
|
|---|
| Protein sequence | MPRDGSISRE KILAAAQEEF LERGFDRASI RSIGQRAGLT SAALYRHFEN KEEIFASLVE
PGLQAINEWM DDHMSRAYAD IEVDKAEEAA SRSEVDMMRD VVFPNRTAFK LLLCRSQGTA
HEDFIHDLVE QQQKDLSRGL VWLKKKGYPV KEPSDETLHM LMSAYITALF EPIAHDYPEE
DAMRYYEAIE RFFLPGWREI LGI
|
|---|
| |