Gene Tfu_0412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTfu_0412 
Symbol 
ID3580011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobifida fusca YX 
KingdomBacteria 
Replicon accessionNC_007333 
Strand- 
Start bp463431 
End bp464081 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content67% 
IMG OID637684098 
ProductTetR family transcriptional regulator 
Protein accessionYP_288473 
Protein GI72160816 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.742667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAAC AGAGTCCCAA AACCCGTAAA AAGCAGCGCA TGACCGGCAA GGAGCGCCGG 
GAACAGCTTC TCGCAATTGG TAGGGAACTG TTCGCCGAAC GCGGCTTCGC CGCCACTTCC 
GTGGAGGAGA TCGCGGCCCG CGCCGGGGTC TCCAAACCGG TGGTCTACGA GCACTTCGGA 
GGTAAAGAAG GGGTCTACGC GGTCGTCGTC GACCGCGAGA TGCAGCGCCT GCTCGGCCTT 
GTCAGCGACG CTCTCGTCGA GGGGAGTCCA CGCCAGAAGC TGGAGCGGGC GGCCCTCGCC 
CTCCTGCAGT ACATCGAGGA GCACAGCGAA GGGTTCCGGA TCTTGGCGCG CGACTCGCAC 
GCCGCGTCCG GGACCGGGAG CTTCGCGAGC CTCATCAGCG ATATCGCCAC CCAGGTGGAG 
CACGTGCTCG CCGAAGAGTT CCGGGCCCGC GGCTACGACC CGAAGCTCGC TCCGCTCTAT 
GCCCAGGCCC TGGTGGGCAT GGTGGCGTTG ACCGGCCAGT GGTGGCTGGA GGTGCGCCGT 
CCCCGCCGGG AGGTGGTGGC AGCCCACCTG GTGAACCTGG CGTGGAACGG CCTGTCCCGT 
CTGGACACCA AACCGCGAGT GGAGGGAGCC CGGTCTCGAC GGCGAGAATA A
 
Protein sequence
MSEQSPKTRK KQRMTGKERR EQLLAIGREL FAERGFAATS VEEIAARAGV SKPVVYEHFG 
GKEGVYAVVV DREMQRLLGL VSDALVEGSP RQKLERAALA LLQYIEEHSE GFRILARDSH 
AASGTGSFAS LISDIATQVE HVLAEEFRAR GYDPKLAPLY AQALVGMVAL TGQWWLEVRR 
PRREVVAAHL VNLAWNGLSR LDTKPRVEGA RSRRRE