| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_4859 |
|---|
| Symbol | |
|---|
| ID | 6310945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 5189719 |
|---|
| End bp | 5190279 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642653538 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_001927490 |
|---|
| Protein GI | 188584045 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.205859 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGA GGACGCGCAG TCGGCGCGAC GACCGTGCGG GAGTGATTCT CGACGCGGCG
GGCGCGGTGC TGCGCCGGGG CGGCGCGCGG GCGCTGACCA TCGACGCGGT GGCGGCACAG
GCGGGTCTGA GCAAGGGCGG CGTGCTGCAC CATTACGCTT CGAAGGACGC GCTGATCCTC
GCCCTCGTCG CCCGCAAGCT TGCGGAGCTG CGCAGCGGGA TCGCCACCTG CGAGGCGGAG
CATCCGCCGG GGCCTGCGGG GCTGGCACTC GGCATGATCG AGCACCTGCG CCGCAGTTAT
TGCGAGGAGG ACGAGTTCAC CCGCGCCCTG CTCCTGGCCT CGGCCGAGAA TCCGGAGGCA
CTCGCCGACT ATCGTGCCTT CGTGGCCGAG CGGCTGGCGC GATTCGATGC GGCGAAAGGG
CCGCCGGGCG TCGGCGCGGC GTTGTTCTTC GCGCTGCTCG GCATCGTGAT GGGCCGGACC
CTCGGCTTCC ACGATCTGAG CCAGGGGCAG GTCGAACCGC TGCTGGGCGC GCTGGAGCGC
GCGGCACGAG AACTCGACTG A
|
|---|
| Protein sequence | MSQRTRSRRD DRAGVILDAA GAVLRRGGAR ALTIDAVAAQ AGLSKGGVLH HYASKDALIL
ALVARKLAEL RSGIATCEAE HPPGPAGLAL GMIEHLRRSY CEEDEFTRAL LLASAENPEA
LADYRAFVAE RLARFDAAKG PPGVGAALFF ALLGIVMGRT LGFHDLSQGQ VEPLLGALER
AARELD
|
|---|
| |