Gene Sros_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3836 
Symbol 
ID8667126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4275350 
End bp4275889 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339498 
Protein GI271965302 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0612117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGACCC GAGCCCGAGA ACGCCTGCTG GACACCGCCG AGGAGCTCTT CTACGCCGAG 
GGCATCCGAG TCGTCGGCGT AGAGCAGATA CTGGCCGTCT CCAAAGTCGG CCGCGCCTCC
TTCTACCGGC ACTTCCCGAG CAAGGACGAC CTGGTCGTGG CCATGCTCGA ACGTCGTGAC
CTGCGGTGGC GCGAATGGCT GGCCGAGCGG GTCGCCGCCC ACGGCGGCGG GCCGCTGGCG
GTCTTCGACG CGCTCGCGGA ACGGTTCGCC CGCGCCGATT TCCGGGGGTG CGCGTTCATC
AACACGATGA TCGAGAGCGC CGACCCCGGC AGCCCGGCAC ACCGCGTCGC GACCGACCAC
AAGAGCCGGG TGACCGACTA TGTAGAGTCC CTGCTGGTCA CGGCCGGCCA CCGCGACTCG
GCCACGCTCG CCCGGCAGCT CGTCATGCTC ATGGACGGTG CGATCGTCAC CGCGCTACGC
GAGCGTTCGG TCGTCCCCGC CGAGCAGGCC CGTGCCATCG CCGCCACCCT GCTGGCCTGA
 
Protein sequence
MPTRARERLL DTAEELFYAE GIRVVGVEQI LAVSKVGRAS FYRHFPSKDD LVVAMLERRD 
LRWREWLAER VAAHGGGPLA VFDALAERFA RADFRGCAFI NTMIESADPG SPAHRVATDH
KSRVTDYVES LLVTAGHRDS ATLARQLVML MDGAIVTALR ERSVVPAEQA RAIAATLLA