Gene Rleg_6328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRleg_6328 
Symbol 
ID8016942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhizobium leguminosarum bv. trifolii WSM1325 
KingdomBacteria 
Replicon accessionNC_012854 
Strand+ 
Start bp43691 
End bp44290 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content60% 
IMG OID644828123 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002979323 
Protein GI241554110 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00138827 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACA GTGCCGAGCA TAAGCAGGAG ACCCGAACGC GGGTCATTGC CGCGGCTGGA 
CGGGTTTTCA GACAGGAAGG CTATGGCGGT GCGGGCATCG ATTCATTGAC CAAGGCGGCA 
GGCGTGACCA ACGGCGCCTT CTACGGACAT TTCAAGTCCA AGGGCGAAGC CTTTCGAACC 
GCCGTGCTAA CCGGCCTAGA AGAGCTGCGG CAAGGAATTG CGGGATTAAA GGCCAGTCAA 
CCGAAAGACT GGCTGGCGAC ATTCGTCGGC TACTATCTCG GCTATAAAAG AACCTGCGAT 
CTGGGTGAGA GCTGCGCTCT GCCGAGCCTT TCCCCCGACG TGGTGCGCGC AGACGATGAA 
ACACGAAGCG CCTATACGGT GGAACTCAAA CGTCTCATCG AGGAAATTGC CGTCGGCTTG 
CCGGAGGGTG AGGTATCGGG TCAACCTCAA ACGCGCCGGG AAGACCAGGC GATCTTGCTG 
CTCGCCATGC TCAGTGGCGG TGTGACCCTC GCCCGCGCTG CTTCCGACCC GGCGCTGTCC 
AAACGCATTG CAGACGTCAT CGCGAAGGCT GCGCTGACGG CGATAGACCC TGGAAACTGA
 
Protein sequence
MRYSAEHKQE TRTRVIAAAG RVFRQEGYGG AGIDSLTKAA GVTNGAFYGH FKSKGEAFRT 
AVLTGLEELR QGIAGLKASQ PKDWLATFVG YYLGYKRTCD LGESCALPSL SPDVVRADDE 
TRSAYTVELK RLIEEIAVGL PEGEVSGQPQ TRREDQAILL LAMLSGGVTL ARAASDPALS 
KRIADVIAKA ALTAIDPGN