More than 300 homologs were found in PanDaTox collection
for query gene Lcho_4331 on replicon NC_010524
Organism: Leptothrix cholodnii SP-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010524  Lcho_4331  methyl-accepting chemotaxis sensory transducer  100 
 
 
534 aa  1067    Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.555356 
 
 
-
 
NC_011992  Dtpsy_2974  methyl-accepting chemotaxis sensory transducer with Cache sensor  53.09 
 
 
579 aa  507  9.999999999999999e-143  Acidovorax ebreus TPSY  Bacteria  hitchhiker  0.00885268  n/a   
 
 
-
 
NC_008782  Ajs_3664  methyl-accepting chemotaxis sensory transducer  52.9 
 
 
598 aa  504  1e-141  Acidovorax sp. JS42  Bacteria  normal  0.197645  normal 
 
 
-
 
NC_008752  Aave_2643  methyl-accepting chemotaxis sensory transducer  45.69 
 
 
541 aa  394  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0238907  normal  0.0164957 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  44.47 
 
 
585 aa  392  1e-107  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012791  Vapar_4188  methyl-accepting chemotaxis sensory transducer with Cache sensor  45.14 
 
 
566 aa  379  1e-103  Variovorax paradoxus S110  Bacteria  normal  0.210427  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  46.5 
 
 
621 aa  367  1e-100  Ralstonia pickettii 12J  Bacteria  normal  normal  0.203772 
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.3 
 
 
618 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5641  methyl-accepting chemotaxis sensory transducer  41.59 
 
 
519 aa  360  3e-98  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  43.41 
 
 
519 aa  360  4e-98  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1155  methyl-accepting chemotaxis transducer transmembrane protein  45.17 
 
 
629 aa  357  3.9999999999999996e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.852924 
 
 
-
 
NC_007952  Bxe_B2628  methyl-accepting chemotaxis sensory transducer  42.02 
 
 
515 aa  353  5.9999999999999994e-96  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.0020256  hitchhiker  0.000579335 
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  42.61 
 
 
587 aa  352  1e-95  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_010676  Bphyt_4450  methyl-accepting chemotaxis sensory transducer  42.38 
 
 
519 aa  348  1e-94  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000313766  normal 
 
 
-
 
NC_010676  Bphyt_6000  methyl-accepting chemotaxis sensory transducer  43.16 
 
 
513 aa  347  4e-94  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.292044 
 
 
-
 
NC_003296  RS02605  putative methyl-accepting chemotaxis transducer transmembrane protein  44.05 
 
 
513 aa  346  5e-94  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0414906  normal  0.0642458 
 
 
-
 
NC_009074  BURPS668_0502  methyl-accepting chemotaxis protein  45.26 
 
 
546 aa  344  2e-93  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A4159  methyl-accepting chemotaxis sensory transducer  44.1 
 
 
611 aa  344  2e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B2237  methyl-accepting chemotaxis sensory transducer  43.77 
 
 
513 aa  345  2e-93  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4414  methyl-accepting chemotaxis sensory transducer  43.22 
 
 
518 aa  344  2.9999999999999997e-93  Delftia acidovorans SPH-1  Bacteria  normal  0.684904  normal 
 
 
-
 
NC_008785  BMASAVP1_A0157  methyl-accepting chemotaxis protein  45.26 
 
 
546 aa  343  4e-93  Burkholderia mallei SAVP1  Bacteria  normal  0.293853  n/a   
 
 
-
 
NC_008836  BMA10229_A1435  methyl-accepting chemotaxis protein  45.26 
 
 
546 aa  343  4e-93  Burkholderia mallei NCTC 10229  Bacteria  normal  0.631191  n/a   
 
 
-
 
NC_009076  BURPS1106A_0520  methyl-accepting chemotaxis protein  45.26 
 
 
546 aa  343  4e-93  Burkholderia pseudomallei 1106a  Bacteria  normal  0.640738  n/a   
 
 
-
 
NC_009080  BMA10247_2862  methyl-accepting chemotaxis protein  45.26 
 
 
546 aa  343  4e-93  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2167  methyl-accepting chemotaxis sensory transducer  43.53 
 
 
585 aa  343  5.999999999999999e-93  Geobacter uraniireducens Rf4  Bacteria  normal  0.38945  n/a   
 
 
-
 
NC_010623  Bphy_5380  methyl-accepting chemotaxis sensory transducer  43.85 
 
 
524 aa  341  2e-92  Burkholderia phymatum STM815  Bacteria  normal  0.653994  normal  0.987419 
 
 
-
 
NC_007434  BURPS1710b_0685  methyl-accepting chemotaxis protein  45.01 
 
 
526 aa  339  5.9999999999999996e-92  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA3184  methyl-accepting chemotaxis protein  45.72 
 
 
511 aa  337  1.9999999999999998e-91  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_4117  methyl-accepting chemotaxis sensory transducer  41.97 
 
 
545 aa  338  1.9999999999999998e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  0.36552  normal 
 
 
-
 
NC_010557  BamMC406_6172  methyl-accepting chemotaxis sensory transducer  43.18 
 
 
542 aa  337  1.9999999999999998e-91  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5547  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
520 aa  336  7e-91  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I0438  methyl-accepting chemotaxis protein  45.4 
 
 
512 aa  336  7e-91  Burkholderia thailandensis E264  Bacteria  normal  0.212381  n/a   
 
 
-
 
NC_010681  Bphyt_0557  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
627 aa  336  7e-91  Burkholderia phytofirmans PsJN  Bacteria  normal  0.191348  normal  0.480006 
 
 
-
 
NC_010551  BamMC406_2751  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
521 aa  335  1e-90  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3823  methyl-accepting chemotaxis sensory transducer  42.66 
 
 
513 aa  334  2e-90  Burkholderia phymatum STM815  Bacteria  normal  normal  0.793143 
 
 
-
 
NC_012857  Rpic12D_4347  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.52 
 
 
513 aa  335  2e-90  Ralstonia pickettii 12D  Bacteria  normal  normal  0.473159 
 
 
-
 
NC_010678  Rpic_4237  methyl-accepting chemotaxis sensory transducer  42.52 
 
 
513 aa  335  2e-90  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3227  methyl-accepting chemotaxis sensory transducer  43.39 
 
 
518 aa  335  2e-90  Burkholderia phymatum STM815  Bacteria  normal  0.543154  normal 
 
 
-
 
NC_012880  Dd703_1719  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.55 
 
 
517 aa  334  2e-90  Dickeya dadantii Ech703  Bacteria  unclonable  0.00000712436  n/a   
 
 
-
 
NC_009075  BURPS668_A1710  methyl-accepting chemotaxis protein  42.5 
 
 
517 aa  332  9e-90  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1623  methyl-accepting chemotaxis protein  42.5 
 
 
517 aa  332  1e-89  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2891  methyl-accepting chemotaxis sensory transducer  43.79 
 
 
521 aa  332  1e-89  Burkholderia ambifaria AMMD  Bacteria  normal  0.657214  n/a   
 
 
-
 
NC_007963  Csal_2778  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
544 aa  331  2e-89  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.643433  n/a   
 
 
-
 
NC_007348  Reut_B5230  methyl-accepting chemotaxis sensory transducer  41.2 
 
 
518 aa  330  3e-89  Ralstonia eutropha JMP134  Bacteria  normal  0.530292  n/a   
 
 
-
 
NC_010086  Bmul_3780  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
517 aa  330  3e-89  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0330596 
 
 
-
 
NC_010552  BamMC406_4727  methyl-accepting chemotaxis sensory transducer  42 
 
 
517 aa  329  7e-89  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.308358 
 
 
-
 
NC_010676  Bphyt_6769  methyl-accepting chemotaxis sensory transducer  40.69 
 
 
519 aa  329  7e-89  Burkholderia phytofirmans PsJN  Bacteria  normal  0.176172  normal  0.340215 
 
 
-
 
NC_008391  Bamb_4204  methyl-accepting chemotaxis sensory transducer  42.19 
 
 
517 aa  329  8e-89  Burkholderia ambifaria AMMD  Bacteria  normal  0.305878  normal 
 
 
-
 
NC_007952  Bxe_B2784  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
542 aa  328  2.0000000000000001e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5935  methyl-accepting chemotaxis sensory transducer  42.47 
 
 
520 aa  328  2.0000000000000001e-88  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B0881  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
517 aa  327  3e-88  Burkholderia sp. 383  Bacteria  normal  normal  0.284562 
 
 
-
 
NC_013421  Pecwa_2070  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.44 
 
 
519 aa  327  3e-88  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1028  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.9 
 
 
532 aa  327  3e-88  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2632  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.67 
 
 
515 aa  325  1e-87  Ralstonia pickettii 12D  Bacteria  normal  0.397554  normal  0.945455 
 
 
-
 
NC_010682  Rpic_3042  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
515 aa  325  1e-87  Ralstonia pickettii 12J  Bacteria  normal  0.401177  normal 
 
 
-
 
NC_010622  Bphy_0289  methyl-accepting chemotaxis sensory transducer  43.15 
 
 
598 aa  325  1e-87  Burkholderia phymatum STM815  Bacteria  normal  normal  0.759991 
 
 
-
 
NC_009078  BURPS1106A_A2638  methyl-accepting chemotaxis protein  40.42 
 
 
521 aa  322  7e-87  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0353  methyl-accepting chemotaxis sensory transducer with Cache sensor  40.16 
 
 
564 aa  323  7e-87  Acidovorax ebreus TPSY  Bacteria  normal  0.244374  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1043  putative methyl-accepting chemotaxis transducer transmembrane protein  40.42 
 
 
521 aa  322  7e-87  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2780  methyl-accepting chemotaxis protein  40.42 
 
 
521 aa  322  7e-87  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3544  methyl-accepting chemotaxis sensory transducer  41.41 
 
 
541 aa  322  9.999999999999999e-87  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.256262  n/a   
 
 
-
 
NC_008543  Bcen2424_4823  methyl-accepting chemotaxis sensory transducer  41.41 
 
 
541 aa  322  9.999999999999999e-87  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.224381 
 
 
-
 
NC_007650  BTH_II1198  methyl-accepting chemotaxis protein  44.35 
 
 
482 aa  321  1.9999999999999998e-86  Burkholderia thailandensis E264  Bacteria  normal  0.311579  n/a   
 
 
-
 
NC_003295  RSc2799  putative methyl-accepting chemotaxis transmembrane protein  41.46 
 
 
515 aa  320  3e-86  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.00825356  normal  0.849966 
 
 
-
 
NC_007510  Bcep18194_A6164  methyl-accepting chemotaxis sensory transducer  42.6 
 
 
544 aa  320  3e-86  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3217  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.37 
 
 
584 aa  320  6e-86  Geobacter sp. M21  Bacteria  n/a    normal  0.480757 
 
 
-
 
NC_010515  Bcenmc03_5460  methyl-accepting chemotaxis sensory transducer  41.02 
 
 
517 aa  319  7.999999999999999e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.601436  normal  0.166688 
 
 
-
 
NC_010524  Lcho_2167  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
678 aa  319  9e-86  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.195593 
 
 
-
 
NC_012917  PC1_1797  methyl-accepting chemotaxis sensory transducer with Cache sensor  41.86 
 
 
519 aa  318  1e-85  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.00249048  n/a   
 
 
-
 
NC_010557  BamMC406_6056  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
512 aa  317  2e-85  Burkholderia ambifaria MC40-6  Bacteria  normal  0.301677  normal 
 
 
-
 
NC_010676  Bphyt_6518  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
514 aa  318  2e-85  Burkholderia phytofirmans PsJN  Bacteria  normal  0.73924  normal 
 
 
-
 
NC_007435  BURPS1710b_A0212  methyl-accepting chemotaxis protein  45.43 
 
 
464 aa  317  4e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  0.387539  n/a   
 
 
-
 
NC_008392  Bamb_6352  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
512 aa  317  5e-85  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1044  methyl-accepting chemotaxis sensory transducer  40.8 
 
 
584 aa  316  7e-85  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2845  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
545 aa  313  3.9999999999999997e-84  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.788597  normal 
 
 
-
 
NC_010084  Bmul_0469  methyl-accepting chemotaxis sensory transducer  42.77 
 
 
549 aa  311  1e-83  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2488  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.84 
 
 
512 aa  312  1e-83  Dickeya dadantii Ech703  Bacteria  normal  0.0783891  n/a   
 
 
-
 
NC_008060  Bcen_2221  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
545 aa  312  1e-83  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2834  methyl-accepting chemotaxis sensory transducer  42.41 
 
 
545 aa  312  1e-83  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  55.99 
 
 
597 aa  312  1e-83  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3031  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.12 
 
 
529 aa  309  6.999999999999999e-83  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  64.62 
 
 
584 aa  306  8.000000000000001e-82  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_5545  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
512 aa  305  1.0000000000000001e-81  Burkholderia phymatum STM815  Bacteria  normal  normal  0.857112 
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  53.25 
 
 
594 aa  303  4.0000000000000003e-81  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_007963  Csal_1423  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
584 aa  303  7.000000000000001e-81  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_6446  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
512 aa  302  1e-80  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6278  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
512 aa  301  1e-80  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.236466  normal  0.246568 
 
 
-
 
NC_008544  Bcen2424_6681  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
512 aa  302  1e-80  Burkholderia cenocepacia HI2424  Bacteria  normal  0.292072  normal 
 
 
-
 
NC_008784  BMASAVP1_1305  putative methyl-accepting chemotaxis protein  41.61 
 
 
485 aa  300  4e-80  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A0161  putative methyl-accepting chemotaxis protein  41.61 
 
 
485 aa  300  4e-80  Burkholderia mallei NCTC 10247  Bacteria  normal  0.573068  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  54.32 
 
 
554 aa  300  4e-80  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  53.21 
 
 
589 aa  298  1e-79  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_006349  BMAA0135  putative methyl-accepting chemotaxis protein  42.01 
 
 
456 aa  296  6e-79  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_24360  chemotaxis sensory transducer  37.16 
 
 
544 aa  295  1e-78  Azotobacter vinelandii DJ  Bacteria  normal  0.249262  n/a   
 
 
-
 
NC_010086  Bmul_4779  methyl-accepting chemotaxis sensory transducer  38.54 
 
 
506 aa  293  6e-78  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  52.73 
 
 
573 aa  293  7e-78  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  52.33 
 
 
602 aa  293  7e-78  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  53.12 
 
 
550 aa  291  2e-77  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  55.23 
 
 
556 aa  290  3e-77  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  55.48 
 
 
586 aa  291  3e-77  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
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