| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_4331 |
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| Symbol | |
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| ID | 6164057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | - |
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| Start bp | 4846854 |
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| End bp | 4848458 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641667108 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001793347 |
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| Protein GI | 171060998 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG4564] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.555356 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGG GGGACCACCG GAGTATTCGC CAAGTGTCCA CACCCACCAG CTTCAGACAG
CGCCTTCAGA CGCTGGTCGC CGTCTCTCTG CTGGCCGTTC TGGCCTTTTC GGTCGCCACC
GTCTGGATGA CGCGCGATCA GATCACGAGC GGCCGCAAGG CGGTGCTGGT GGCCACGGTC
GAATCGGCAC ACAGCCTCGT GATGAGCTTT CACGACCAGG CCAAGGCGGG CCGGATGTCC
GACGAACAGG CGCGGGCGGC CGCCGTGGCG GCGCTGCGCG GCATCCGCTA CGGCAACGGC
GACTACGTCT ACGTCTGGAG CCTGGAAGGC GTGGGCGTGA TGCACCCGAT CAAGCCGGAA
TGGGAAGGCC AGATGATGAT CGGCAAGGTC AAGGACGGCA CCGGGGGTGA CGTGATCGGC
GCCCTGTCGG CCGGCATGAA GGCCAGCCGC GACGGCACCG CCTTCGTCGA GACCCACTTT
CCCCGCCCCG GCCATACCGA GCCGGTGGCC AAGCTGCAGT TCCTCAAGCA GGTGCCCGAC
TGGAACTGGA TGGTGGGCTC GGGCCTGTAC ATGGACGACG TGAGCGCCGC GGTGCGCACC
ACCACGCTGC AGGTCGGCGC GCTCGCGGCC GCGATCCTGC TGGGCATCGG CGCCGTCTGC
CTGTGGACCT ACCGCGGCGT CCTGCACCAG CTGGGGGGCG AGCCTGCGCT GGCGGCACAG
GTCATGTCGC AGGTGGCCCA GGGCCAGCTC GACATCGCCA TCCCCACGGC ACCGGCCGGC
AGCCTGATGG ACGACCTGCG ACTGATGGTG CAGTCCTTGC GCGGCACCGT GTCGCAGGTG
CGTGAAACGT CGGACAGCGT GAACCTGGCC GCCGGCGAGA TCGCCAACGG CAATGCCGAT
CTCGGTGCCC GCACCGAGCA GACCGCGGCC AGCCTGCAAC GCACCGCCAG TGCGATGGAG
CAGCTCGTCA GCACGGTGCG GCACACGGCC GAGTCGGCCG GCAACGCCAA CGCGCTGGCC
GCCTCGGCCG CCGCCGAGGC CCAGCGCGGC GGTGCGGCCG TGACCGCCGT CGAGCACACG
ATGGGCGAGA TCAACCAGTC CAGCGCCCGC ATGGCCGACA TCATCGGCAC CATCGACGGC
ATCGCCTTCC AGACCAACAT CCTCGCGCTC AACGCAGCCG TCGAGGCCGC ACGTGCCGGC
GAGCAGGGCC GCGGCTTCGC GGTGGTAGCC AGCGAGGTGC GCACGCTGGC GCAACGCAGT
GCGGACGCGG CCAAGGAAAT CCGCCAGCTC ATCACCGCCA GCATCGACAA GGTGACCTCC
GGCGCCCGCC AGGTGGGCGA CGCCGAACGG ACCATGCGCG ACATCGTCGA CTCGGTTCAA
CGGGTGTCGG CCATCGTCAG CGAGATCAGC GTGGCGTCTG CGCAGCAGAG CCAGGGCCTG
TGCGACGTCA GCGGCGCGGT GTCGCAGCTC GAAGAGATGA CGCAGCGCAA CGCCGCGCTG
GTCGAGCAGT CGGCCGCGGC GGCGCACAGC CTGCACGAAC AGTCGCACCG ACTCTCCGCC
GCCATCAGCA GCTTCCAGGT CGACCGAAGC CTGGCGCCGG CCTGA
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| Protein sequence | MTLGDHRSIR QVSTPTSFRQ RLQTLVAVSL LAVLAFSVAT VWMTRDQITS GRKAVLVATV
ESAHSLVMSF HDQAKAGRMS DEQARAAAVA ALRGIRYGNG DYVYVWSLEG VGVMHPIKPE
WEGQMMIGKV KDGTGGDVIG ALSAGMKASR DGTAFVETHF PRPGHTEPVA KLQFLKQVPD
WNWMVGSGLY MDDVSAAVRT TTLQVGALAA AILLGIGAVC LWTYRGVLHQ LGGEPALAAQ
VMSQVAQGQL DIAIPTAPAG SLMDDLRLMV QSLRGTVSQV RETSDSVNLA AGEIANGNAD
LGARTEQTAA SLQRTASAME QLVSTVRHTA ESAGNANALA ASAAAEAQRG GAAVTAVEHT
MGEINQSSAR MADIIGTIDG IAFQTNILAL NAAVEAARAG EQGRGFAVVA SEVRTLAQRS
ADAAKEIRQL ITASIDKVTS GARQVGDAER TMRDIVDSVQ RVSAIVSEIS VASAQQSQGL
CDVSGAVSQL EEMTQRNAAL VEQSAAAAHS LHEQSHRLSA AISSFQVDRS LAPA
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