More than 300 homologs were found in PanDaTox collection
for query gene Gbem_2264 on replicon NC_011146
Organism: Geobacter bemidjiensis Bem



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012918  GM21_1958  formate dehydrogenase family accessory protein FdhD  97.65 
 
 
468 aa  942    Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2264  formate dehydrogenase family accessory protein FdhD  100 
 
 
468 aa  959    Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3370  formate dehydrogenase family accessory protein FdhD  61.9 
 
 
487 aa  591  1e-168  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_3385  formate dehydrogenase family accessory protein FdhD  61.43 
 
 
483 aa  587  1e-166  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1062  formate dehydrogenase, subunit FdhD  59.53 
 
 
479 aa  552  1e-156  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.0656292 
 
 
-
 
NC_002939  GSU0780  formate dehydrogenase accessory protein FdhD  60.17 
 
 
478 aa  550  1e-155  Geobacter sulfurreducens PCA  Bacteria  normal  0.162723  n/a   
 
 
-
 
NC_007517  Gmet_2076  formate dehydrogenase, subunit FdhD  67.49 
 
 
263 aa  339  5.9999999999999996e-92  Geobacter metallireducens GS-15  Bacteria  hitchhiker  9.82479e-16  normal 
 
 
-
 
NC_012918  GM21_2817  formate dehydrogenase family accessory protein FdhD  64.82 
 
 
255 aa  330  5.0000000000000004e-89  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_1437  formate dehydrogenase family accessory protein FdhD  62.85 
 
 
255 aa  323  4e-87  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1293  formate dehydrogenase family accessory protein FdhD  57.49 
 
 
255 aa  285  1.0000000000000001e-75  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.0000222407  n/a   
 
 
-
 
NC_012918  GM21_2990  formate dehydrogenase family accessory protein FdhD  56.05 
 
 
255 aa  277  2e-73  Geobacter sp. M21  Bacteria  n/a    hitchhiker  3.68227e-19 
 
 
-
 
NC_011146  Gbem_1571  formate dehydrogenase family accessory protein FdhD  65.28 
 
 
224 aa  266  4e-70  Geobacter bemidjiensis Bem  Bacteria  normal  0.915913  n/a   
 
 
-
 
NC_012918  GM21_2642  formate dehydrogenase family accessory protein FdhD  64.25 
 
 
235 aa  262  8e-69  Geobacter sp. M21  Bacteria  n/a    normal  0.0395986 
 
 
-
 
NC_008609  Ppro_3519  formate dehydrogenase accessory protein FdhD  58.46 
 
 
229 aa  238  2e-61  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2175  formate dehydrogenase family accessory protein FdhD  37.45 
 
 
260 aa  167  5e-40  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.145342 
 
 
-
 
NC_013525  Tter_0989  formate dehydrogenase family accessory protein FdhD  38 
 
 
266 aa  163  7e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011773  BCAH820_3578  formate dehydrogenase accessory protein  35.18 
 
 
265 aa  163  8.000000000000001e-39  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS3364  formate dehydrogenase accessory protein  34.78 
 
 
265 aa  158  2e-37  Bacillus anthracis str. Sterne  Bacteria  normal  0.144836  n/a   
 
 
-
 
NC_007530  GBAA_3628  formate dehydrogenase accessory protein  34.78 
 
 
265 aa  158  2e-37  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2174  molybdenum cofactor guanylyltransferase  43.81 
 
 
198 aa  158  2e-37  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.881016  normal  0.0453218 
 
 
-
 
NC_005957  BT9727_3328  formate dehydrogenase accessory protein  34.78 
 
 
265 aa  157  3e-37  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0183588  n/a   
 
 
-
 
NC_012918  GM21_1097  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  43.48 
 
 
205 aa  157  4e-37  Geobacter sp. M21  Bacteria  n/a    normal  0.630746 
 
 
-
 
NC_006274  BCZK3278  formate dehydrogenase accessory protein  33.86 
 
 
265 aa  154  2.9999999999999998e-36  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_3585  formate dehydrogenase accessory protein  33.99 
 
 
265 aa  154  4e-36  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A3678  formate dehydrogenase accessory protein  33.6 
 
 
265 aa  154  4e-36  Bacillus cereus B4264  Bacteria  normal  0.688402  n/a   
 
 
-
 
NC_011658  BCAH187_A3595  formate dehydrogenase accessory protein  33.99 
 
 
265 aa  153  5e-36  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1157  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  41.15 
 
 
197 aa  150  4e-35  Geobacter lovleyi SZ  Bacteria  normal  0.0340389  n/a   
 
 
-
 
NC_009632  SaurJH1_2347  formate dehydrogenase accessory protein  33.2 
 
 
265 aa  149  8e-35  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2305  formate dehydrogenase accessory protein  33.2 
 
 
265 aa  149  8e-35  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0556  formate dehydrogenase accessory protein  33.99 
 
 
268 aa  149  1.0000000000000001e-34  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0498  formate dehydrogenase accessory protein  33.99 
 
 
268 aa  149  1.0000000000000001e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1840  formate dehydrogenase accessory protein  33.07 
 
 
268 aa  149  1.0000000000000001e-34  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00380429  n/a   
 
 
-
 
NC_007530  GBAA_0588  formate dehydrogenase accessory protein  33.99 
 
 
268 aa  149  1.0000000000000001e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0715  formate dehydrogenase accessory protein  33.2 
 
 
268 aa  149  1.0000000000000001e-34  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0644  formate dehydrogenase accessory protein  33.99 
 
 
268 aa  149  1.0000000000000001e-34  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK0500  formate dehydrogenase accessory protein  33.99 
 
 
268 aa  148  2.0000000000000003e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0654  formate dehydrogenase accessory protein  32.81 
 
 
268 aa  147  3e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3374  formate dehydrogenase family accessory protein FdhD  36.55 
 
 
260 aa  147  3e-34  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_0466  formate dehydrogenase accessory protein  33.46 
 
 
262 aa  147  3e-34  Geobacillus sp. WCH70  Bacteria  normal  0.276769  n/a   
 
 
-
 
NC_009253  Dred_2876  formate dehydrogenase family accessory protein FdhD  34.78 
 
 
262 aa  146  7.0000000000000006e-34  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0487293  n/a   
 
 
-
 
NC_011772  BCG9842_B4711  formate dehydrogenase accessory protein  32.41 
 
 
268 aa  145  2e-33  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A0626  formate dehydrogenase accessory protein  32.41 
 
 
268 aa  144  3e-33  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0501  formate dehydrogenase accessory protein  32.69 
 
 
268 aa  144  3e-33  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0300  putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB  37.95 
 
 
392 aa  142  9.999999999999999e-33  Geobacter metallireducens GS-15  Bacteria  normal  0.384307  normal 
 
 
-
 
NC_013525  Tter_1466  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  40.11 
 
 
202 aa  142  9.999999999999999e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011146  Gbem_3162  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  39.9 
 
 
205 aa  142  9.999999999999999e-33  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2277  formate dehydrogenase family accessory protein FdhD  34.17 
 
 
258 aa  141  1.9999999999999998e-32  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.181166  normal 
 
 
-
 
NC_009674  Bcer98_0504  formate dehydrogenase accessory protein  34.29 
 
 
269 aa  140  3.9999999999999997e-32  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0909  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  37.63 
 
 
195 aa  138  2e-31  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0654  putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB  39.89 
 
 
347 aa  138  3.0000000000000003e-31  Ammonifex degensii KC4  Bacteria  normal  0.425829  n/a   
 
 
-
 
NC_008554  Sfum_1205  formate dehydrogenase family accessory protein FdhD  33.86 
 
 
303 aa  137  3.0000000000000003e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.495294 
 
 
-
 
NC_013411  GYMC61_1343  formate dehydrogenase accessory protein  33.6 
 
 
263 aa  137  4e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011898  Ccel_1598  molybdopterin-guanine dinucleotide biosynthesis protein A  38.04 
 
 
188 aa  136  9.999999999999999e-31  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0464  molybdopterin-guanine dinucleotide biosynthesis protein A-like protein  38.71 
 
 
198 aa  132  9e-30  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4819  formate dehydrogenase subunit FdhD  30.56 
 
 
298 aa  132  2.0000000000000002e-29  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_0053  formate dehydrogenase, subunit FdhD  31.73 
 
 
281 aa  130  5.0000000000000004e-29  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1923  formate dehydrogenase family accessory protein FdhD  33.21 
 
 
280 aa  130  6e-29  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1639  formate dehydrogenase accessory protein  34.25 
 
 
223 aa  128  2.0000000000000002e-28  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3566  molybdenum cofactor guanylyltransferase  36.46 
 
 
200 aa  127  3e-28  Anaeromyxobacter sp. K  Bacteria  normal  0.893088  n/a   
 
 
-
 
NC_008577  Shewana3_3910  formate dehydrogenase accessory protein FdhD, putative  30.67 
 
 
298 aa  128  3e-28  Shewanella sp. ANA-3  Bacteria  normal  0.131875  normal 
 
 
-
 
NC_011891  A2cp1_3634  molybdenum cofactor guanylyltransferase  36.46 
 
 
200 aa  126  7e-28  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1033  formate dehydrogenase family accessory protein FdhD  34.32 
 
 
266 aa  126  9e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0364714  n/a   
 
 
-
 
NC_009831  Ssed_4427  formate dehydrogenase, subunit FdhD  28.57 
 
 
295 aa  126  1e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4218  formate dehydrogenase subunit FdhD  30.08 
 
 
296 aa  125  1e-27  Shewanella baltica OS195  Bacteria  normal  0.072328  normal  0.431807 
 
 
-
 
NC_013165  Shel_06930  formate dehydrogenase family accessory protein FdhD  32.55 
 
 
297 aa  125  1e-27  Slackia heliotrinireducens DSM 20476  Bacteria  normal  normal  0.215671 
 
 
-
 
NC_011663  Sbal223_0239  formate dehydrogenase subunit FdhD  30.08 
 
 
290 aa  125  1e-27  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000144632 
 
 
-
 
NC_008321  Shewmr4_3714  formate dehydrogenase, subunit FdhD  30.08 
 
 
298 aa  126  1e-27  Shewanella sp. MR-4  Bacteria  normal  0.272943  normal  0.525322 
 
 
-
 
NC_009665  Shew185_4100  formate dehydrogenase subunit FdhD  30.08 
 
 
296 aa  126  1e-27  Shewanella baltica OS185  Bacteria  normal  0.015822  n/a   
 
 
-
 
NC_009052  Sbal_4130  formate dehydrogenase subunit FdhD  30.08 
 
 
296 aa  126  1e-27  Shewanella baltica OS155  Bacteria  normal  0.142791  n/a   
 
 
-
 
NC_010718  Nther_1264  formate dehydrogenase family accessory protein FdhD  35.5 
 
 
205 aa  125  2e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.407765  normal 
 
 
-
 
NC_009783  VIBHAR_02271  hypothetical protein  33.62 
 
 
276 aa  124  3e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3785  formate dehydrogenase, subunit FdhD  30.08 
 
 
298 aa  124  3e-27  Shewanella sp. MR-7  Bacteria  normal  0.0292467  normal  0.549187 
 
 
-
 
NC_013512  Sdel_2060  formate dehydrogenase family accessory protein FdhD  31.58 
 
 
262 aa  124  4e-27  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.0000863556  n/a   
 
 
-
 
NC_007760  Adeh_3482  molybdenum cofactor guanylyltransferase  36.46 
 
 
200 aa  122  9e-27  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1111  molybdopterin-guanine dinucleotide biosynthesis protein A  37.84 
 
 
195 aa  122  9.999999999999999e-27  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0051  formate dehydrogenase, subunit FdhD  31.25 
 
 
284 aa  122  9.999999999999999e-27  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003500  formate dehydrogenase chain D  32.48 
 
 
277 aa  121  1.9999999999999998e-26  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1126  formate dehydrogenase accessory protein  30.51 
 
 
337 aa  122  1.9999999999999998e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3619  formate dehydrogenase accessory protein FdhD, putative  31.08 
 
 
282 aa  121  1.9999999999999998e-26  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_4143  formate dehydrogenase subunit FdhD  28.57 
 
 
280 aa  121  3e-26  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4503  formate dehydrogenase accessory protein FdhD, putative  29.1 
 
 
249 aa  120  3.9999999999999996e-26  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_0343  formate dehydrogenase, subunit FdhD  29.55 
 
 
298 aa  120  4.9999999999999996e-26  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00229888  n/a   
 
 
-
 
NC_010424  Daud_0985  putative bifunctional molybdopterin-guanine dinucleotide biosynthesis protein MobA/MobB  36.9 
 
 
374 aa  120  6e-26  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3467  formate dehydrogenase family accessory protein FdhD  33.6 
 
 
294 aa  120  7e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_1058  formate dehydrogenase family accessory protein FdhD  32.13 
 
 
264 aa  119  9e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0839  formate dehydrogenase, subunit FdhD  31.56 
 
 
290 aa  119  9.999999999999999e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.145713  normal 
 
 
-
 
NC_011832  Mpal_1216  formate dehydrogenase family accessory protein FdhD  33.47 
 
 
261 aa  119  9.999999999999999e-26  Methanosphaerula palustris E1-9c  Archaea  normal  0.944709  normal  0.100536 
 
 
-
 
NC_009943  Dole_3175  molybdopterin-guanine dinucleotide biosynthesis protein A  35.6 
 
 
202 aa  119  9.999999999999999e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.231435  n/a   
 
 
-
 
NC_013204  Elen_0621  molybdopterin-guanine dinucleotide biosynthesis protein B  35.29 
 
 
445 aa  119  9.999999999999999e-26  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.611494 
 
 
-
 
NC_008346  Swol_1030  formate dehydrogenase accessory protein  31.68 
 
 
263 aa  119  9.999999999999999e-26  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3075  molybdopterin-guanine dinucleotide biosynthesis protein A  37.23 
 
 
191 aa  119  9.999999999999999e-26  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.0147556  unclonable  0.00000746757 
 
 
-
 
NC_008825  Mpe_A1176  putative fdhD protein  30.74 
 
 
299 aa  119  1.9999999999999998e-25  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.108793 
 
 
-
 
NC_011830  Dhaf_1399  molybdopterin-guanine dinucleotide biosynthesis protein A  35.94 
 
 
207 aa  118  3e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_2122  formate dehydrogenase family accessory protein FdhD  33.04 
 
 
259 aa  116  6.9999999999999995e-25  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.545765  normal 
 
 
-
 
NC_011662  Tmz1t_3715  formate dehydrogenase subunit FdhD  29.06 
 
 
275 aa  116  8.999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  0.351414  n/a   
 
 
-
 
NC_011312  VSAL_I1448  putative formate dehydrogenase accessory protein  31.25 
 
 
283 aa  115  2.0000000000000002e-24  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2047  molybdopterin-guanine dinucleotide biosynthesis protein  32.8 
 
 
198 aa  114  3e-24  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1762  molybdopterin-guanine dinucleotide biosynthesis protein-like protein  32.8 
 
 
198 aa  114  3e-24  Clostridium perfringens SM101  Bacteria  normal  0.839187  n/a   
 
 
-
 
NC_009664  Krad_3339  formate dehydrogenase family accessory protein FdhD  32.92 
 
 
297 aa  114  3e-24  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.224084 
 
 
-
 
NC_013510  Tcur_3534  formate dehydrogenase family accessory protein FdhD  32.51 
 
 
284 aa  114  4.0000000000000004e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
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