| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4143 |
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| Symbol | |
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| ID | 5664527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 5033480 |
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| End bp | 5034322 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238807 |
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| Product | formate dehydrogenase subunit FdhD |
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| Protein accession | YP_001503988 |
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| Protein GI | 157963954 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGACCC ATATGACTGC AAACAAAAGC AATCCAACGT TAATCAAAAC CAGCACCGAC
GTCCCCCTTA CGATTGCTGT CACCGCAATA AATGAGAATG GCGAGAAAGT GGATAAGTTC
ATTGCTTGCG AACGCCCTCT CACCGTCTAC CTTAACTGGC AGCCTATTGT GACCTTGATG
ACACTGGGTG CTCGAGCAGA AGCGTTATCG TTGGGATACC TTAAAAACCA AGGTTTTATA
TCTGACATCA ACAAGTTAGA GTCTGTGATT GTCGACTGGG ATGTAAATTC AGCCGCTATT
CTGACCAGTG AAAAAATCGA AAATTTAGAC GAAAAACTGT CTGAAAAAAC CGTTACAACT
GGCTGTGGTC AAGGTACGGT TTACGGTGAC TTTATGACTG GGCTCGACGA TATCGATTTA
CCGACCCCGC AGCTAAAGCA AAGCATGATC TATAGCTTGC TAAAGAATAT CAGCGCCTAC
AATGAAACCT ATAAAAATGC CGGTGCAGTG CACGGCTGTG GCTTATGCCG TCAAGATCAA
ATTTTTGGTT TTGTTGAAGA TGTGGGTCGT CACAATGCAG TCGATACTTT AGCAGGTGAA
ATGTGGCTTA ACCAAGATAG CGGTAACGAC AAGCTGTTTT ACACTACAGG GCGCTTAACT
TCTGAGATGG TTATTAAGGT CGCTAAAATG GGGATCCCAG TCGTACTGTC GCGCAGTGGT
GCCACCCAGA TGGGACTAGA GCTTGCACAA AAGCTCGGAA TAACCATGAT AGCCCGTGCT
AAAGGTCGCC ACTTCTTAAT TTATAACGGT GCTGAGAATA TTGAATTTGA TGCACTTTCT
TAA
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| Protein sequence | MMTHMTANKS NPTLIKTSTD VPLTIAVTAI NENGEKVDKF IACERPLTVY LNWQPIVTLM
TLGARAEALS LGYLKNQGFI SDINKLESVI VDWDVNSAAI LTSEKIENLD EKLSEKTVTT
GCGQGTVYGD FMTGLDDIDL PTPQLKQSMI YSLLKNISAY NETYKNAGAV HGCGLCRQDQ
IFGFVEDVGR HNAVDTLAGE MWLNQDSGND KLFYTTGRLT SEMVIKVAKM GIPVVLSRSG
ATQMGLELAQ KLGITMIARA KGRHFLIYNG AENIEFDALS
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