| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3619 |
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| Symbol | |
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| ID | 4605866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 4259347 |
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| End bp | 4260195 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639783040 |
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| Product | formate dehydrogenase accessory protein FdhD, putative |
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| Protein accession | YP_929491 |
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| Protein GI | 119776751 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1526] Uncharacterized protein required for formate dehydrogenase activity |
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| TIGRFAM ID | [TIGR00129] formate dehydrogenase family accessory protein FdhD |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTG CAAAACCCCA CACCCGCTTT ATCAAGACCA GTGCCGAGGC CCCCTTAACC
ATTGCCGTGA CTGCGGTGGA CGAGACAGGC GCCGTGCTCG ACAAGCAAAT CGCCTGTGAG
CGCCCCCTGA CCCTGTATCT TAACTGGCGT CCCATAGTGA CTCTGATGAC CCTGGGAGCC
CGCCCCGAAG CCCTGGCACT GGGATACATG AAAAATCAGG GATTTATCAA AGACCTGGCA
CAATTGGAGT CTGTGATTGT GGATTGGGCG GTCAGCTCGG CGGCCATCAT CACCCGGGAG
CAAACCGACG ATCTGGACAA AAAGTTATCG GAAAAAACCG TCACCACAGG CTGTGGTCAG
GGCACGGTCT ATGGCGATCT GATGGCGGGG CTCGACGACA TCAAACTGCC GGTGCCCAGC
CTCAAACAAA GCACCCTGTA CGGGCTGCTG CGAAACATCA ATGATTACAA CGAAACCTAT
AAAAATGCCG GCGCAGTGCA CGGCTGTGGC CTGTGTGAGG GTGAACAGAT ACGCTCCTTT
GTTGAGGACG TGGGTCGCCA CAATGCGGTA GACACGCTAG CCGGCGAGAT GTGGCTAAAG
GATGAAGTCG GCAGCGACAA GATTTTCTAT ACCACAGGCC GCTTAACCTC GGAGATGGTG
ATAAAGGTGG CCAAAATGGG CATACCTGTA TTGTTGTCCC GCAGCGGCGT GACCCAAATG
GGTCTGGAGC TGGCCCAACA ACTCGGAATC ACCCTCATCG CCAGAGCAAA AGGCCGGCAC
TTTTTGGTAT ATCACGGCGC CGAGACCATA GATTTTGATG CAACCCCAGG GAAGACAGGA
CAAGGATAA
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| Protein sequence | MTAAKPHTRF IKTSAEAPLT IAVTAVDETG AVLDKQIACE RPLTLYLNWR PIVTLMTLGA
RPEALALGYM KNQGFIKDLA QLESVIVDWA VSSAAIITRE QTDDLDKKLS EKTVTTGCGQ
GTVYGDLMAG LDDIKLPVPS LKQSTLYGLL RNINDYNETY KNAGAVHGCG LCEGEQIRSF
VEDVGRHNAV DTLAGEMWLK DEVGSDKIFY TTGRLTSEMV IKVAKMGIPV LLSRSGVTQM
GLELAQQLGI TLIARAKGRH FLVYHGAETI DFDATPGKTG QG
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