98 homologs were found in PanDaTox collection
for query gene Tfu_0976 on replicon NC_007333
Organism: Thermobifida fusca YX



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_0976  hypothetical protein  100 
 
 
158 aa  312  9.999999999999999e-85  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0704  hypothetical protein  69.48 
 
 
176 aa  189  1e-47  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0979  hypothetical protein  41.18 
 
 
201 aa  92.4  2e-18  Thermobifida fusca YX  Bacteria  normal  0.454512  n/a   
 
 
-
 
NC_013595  Sros_7843  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.73 
 
 
137 aa  62.4  0.000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.5414  normal 
 
 
-
 
NC_007333  Tfu_0391  hypothetical protein  40.95 
 
 
136 aa  61.6  0.000000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4246  putative signal transduction histidine kinase  41.28 
 
 
164 aa  60.1  0.00000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.103074 
 
 
-
 
NC_014211  Ndas_5037  putative signal transduction histidine kinase  35.22 
 
 
173 aa  59.3  0.00000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.476889 
 
 
-
 
NC_007333  Tfu_2967  hypothetical protein  37.9 
 
 
166 aa  59.3  0.00000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4139  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.29 
 
 
160 aa  55.8  0.0000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1739  PAS/protein phosphatase 2C-like  33.33 
 
 
817 aa  54.7  0.0000004  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1968  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.09 
 
 
216 aa  54.7  0.0000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.075139  n/a   
 
 
-
 
NC_013510  Tcur_3632  ATP-binding region ATPase domain protein  36.21 
 
 
161 aa  54.7  0.0000005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0743  putative PAS/PAC sensor protein  35.94 
 
 
855 aa  54.7  0.0000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565533 
 
 
-
 
NC_014210  Ndas_2770  putative signal transduction histidine kinase  38.68 
 
 
150 aa  54.3  0.0000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.416371  normal 
 
 
-
 
NC_013510  Tcur_1448  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.28 
 
 
164 aa  54.3  0.0000007  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0047791  n/a   
 
 
-
 
NC_013510  Tcur_4370  putative signal transduction histidine kinase  40.38 
 
 
134 aa  54.3  0.0000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4605  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.66 
 
 
155 aa  53.9  0.0000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1945  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.66 
 
 
142 aa  53.1  0.000001  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00291504  n/a   
 
 
-
 
NC_014210  Ndas_1650  putative signal transduction histidine kinase  38.68 
 
 
150 aa  53.1  0.000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0223546  normal 
 
 
-
 
NC_007333  Tfu_2307  putative regulator  33.94 
 
 
181 aa  52.4  0.000002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1873  putative signal transduction histidine kinase  37.74 
 
 
149 aa  52.4  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4135  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.6 
 
 
188 aa  52.8  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8367  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.35 
 
 
251 aa  53.1  0.000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1173  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.18 
 
 
180 aa  52.4  0.000002  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2582  putative signal transduction histidine kinase  38.68 
 
 
150 aa  52  0.000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0114014 
 
 
-
 
NC_009921  Franean1_1327  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.44 
 
 
211 aa  51.6  0.000004  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_6003  protein serine phosphatase with GAF(s) sensor(s)  34.27 
 
 
616 aa  51.2  0.000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.697266  normal  0.4865 
 
 
-
 
NC_009664  Krad_4499  ATP-binding region ATPase domain protein  35.54 
 
 
365 aa  51.2  0.000005  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000991404  normal  0.031146 
 
 
-
 
NC_013595  Sros_3148  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.27 
 
 
146 aa  51.2  0.000006  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00947281  normal 
 
 
-
 
NC_007333  Tfu_1352  hypothetical protein  37.21 
 
 
145 aa  50.8  0.000007  Thermobifida fusca YX  Bacteria  normal  0.935548  n/a   
 
 
-
 
NC_014165  Tbis_2744  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.39 
 
 
155 aa  50.8  0.000007  Thermobispora bispora DSM 43833  Bacteria  normal  0.813583  normal 
 
 
-
 
NC_014151  Cfla_2966  protein serine/threonine phosphatase  36.09 
 
 
716 aa  50.8  0.000007  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.451872  normal 
 
 
-
 
NC_013510  Tcur_4085  putative signal transduction histidine kinase  36.42 
 
 
160 aa  50.1  0.00001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0664  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.79 
 
 
147 aa  49.3  0.00002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.535186 
 
 
-
 
NC_013595  Sros_6480  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.48 
 
 
134 aa  49.3  0.00002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.903724  normal  0.217215 
 
 
-
 
NC_013131  Caci_1919  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.05 
 
 
150 aa  49.3  0.00002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_2480  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.58 
 
 
159 aa  48.9  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.252056 
 
 
-
 
NC_014210  Ndas_0519  putative signal transduction histidine kinase  37.74 
 
 
165 aa  48.9  0.00003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0025  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.11 
 
 
226 aa  48.5  0.00003  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2536  putative serine/threonine kinase anti-sigma factor  36.54 
 
 
199 aa  48.5  0.00003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0095  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.31 
 
 
174 aa  48.5  0.00004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0305  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.1 
 
 
184 aa  48.1  0.00005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.12283  normal  0.285434 
 
 
-
 
NC_014210  Ndas_4151  putative signal transduction histidine kinase  33.93 
 
 
183 aa  48.1  0.00005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2108  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.59 
 
 
151 aa  48.1  0.00005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.262944 
 
 
-
 
NC_013530  Xcel_3140  protein serine/threonine phosphatase  35.61 
 
 
745 aa  47.8  0.00007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.444013  n/a   
 
 
-
 
NC_014211  Ndas_5442  putative signal transduction histidine kinase  37.86 
 
 
167 aa  47.8  0.00007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013596  Sros_9396  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.19 
 
 
171 aa  47.4  0.00008  Streptosporangium roseum DSM 43021  Bacteria  n/a    n/a   
 
 
-
 
NC_014211  Ndas_5447  putative anti-sigma regulatory factor, serine/threonine protein kinase  44.44 
 
 
178 aa  47.4  0.00008  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.279977  normal 
 
 
-
 
NC_007777  Francci3_0400  putative signal transduction histidine kinase  37.5 
 
 
203 aa  47.4  0.00008  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2511  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.52 
 
 
130 aa  47.4  0.00009  Streptosporangium roseum DSM 43021  Bacteria  normal  0.55888  normal  0.653712 
 
 
-
 
NC_014165  Tbis_1228  putative signal transduction histidine kinase  39 
 
 
169 aa  46.6  0.0001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.141602 
 
 
-
 
NC_014151  Cfla_0586  signal transduction histidine kinase, LytS  36.36 
 
 
123 aa  46.6  0.0001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0183303  hitchhiker  0.00998812 
 
 
-
 
NC_013947  Snas_6464  ATP-binding region ATPase domain-containing protein  37.07 
 
 
164 aa  47  0.0001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.675812 
 
 
-
 
NC_013595  Sros_7294  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.23 
 
 
161 aa  47  0.0001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_1233  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.14 
 
 
151 aa  46.6  0.0002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.226283  n/a   
 
 
-
 
NC_007333  Tfu_2776  hypothetical protein  35.09 
 
 
137 aa  46.2  0.0002  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  40 
 
 
130 aa  45.8  0.0002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7320  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.17 
 
 
288 aa  46.2  0.0002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000252308  decreased coverage  0.00000000279842 
 
 
-
 
NC_009664  Krad_0233  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.37 
 
 
347 aa  45.4  0.0003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.211721  hitchhiker  0.0066599 
 
 
-
 
NC_009380  Strop_4515  hypothetical protein  41.51 
 
 
176 aa  45.4  0.0003  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2379  putative serine/threonine kinaseanti-sigma factor  31.94 
 
 
197 aa  45.4  0.0003  Frankia sp. CcI3  Bacteria  normal  normal  0.084958 
 
 
-
 
NC_009921  Franean1_2634  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.93 
 
 
227 aa  45.4  0.0003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_5025  putative signal transduction histidine kinase  42.2 
 
 
166 aa  45.4  0.0003  Salinispora arenicola CNS-205  Bacteria  normal  0.239464  normal  0.0584008 
 
 
-
 
NC_013510  Tcur_0429  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.86 
 
 
196 aa  45.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1416  putative anti-sigma regulatory factor, serine/threonine protein kinase  43.52 
 
 
151 aa  45.1  0.0004  Thermomonospora curvata DSM 43183  Bacteria  normal  0.034656  n/a   
 
 
-
 
NC_013521  Sked_35220  PAS domain S-box  33.82 
 
 
771 aa  44.7  0.0005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0348  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.56 
 
 
147 aa  44.7  0.0005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3110  putative PAS/PAC sensor protein  31.91 
 
 
697 aa  44.3  0.0006  Thermomonospora curvata DSM 43183  Bacteria  normal  0.63551  n/a   
 
 
-
 
NC_013093  Amir_0969  hypothetical protein  31.06 
 
 
144 aa  44.3  0.0007  Actinosynnema mirum DSM 43827  Bacteria  normal  0.645052  n/a   
 
 
-
 
NC_013595  Sros_8758  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.8 
 
 
192 aa  44.3  0.0007  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2295  hypothetical protein  40.62 
 
 
200 aa  44.3  0.0007  Thermobifida fusca YX  Bacteria  normal  0.147419  n/a   
 
 
-
 
NC_007777  Francci3_2700  putative signal transduction histidine kinase  31.69 
 
 
207 aa  44.3  0.0007  Frankia sp. CcI3  Bacteria  normal  0.738661  normal  0.546363 
 
 
-
 
NC_009664  Krad_1542  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.1 
 
 
355 aa  44.3  0.0007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0477003  hitchhiker  0.00647646 
 
 
-
 
NC_007777  Francci3_1779  putative signal transduction histidine kinase  36.3 
 
 
214 aa  43.9  0.0008  Frankia sp. CcI3  Bacteria  normal  normal  0.144417 
 
 
-
 
NC_009664  Krad_0777  putative anti-sigma regulatory factor, serine/threonine protein kinase  36 
 
 
130 aa  43.5  0.001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0574046  hitchhiker  0.00140169 
 
 
-
 
NC_013510  Tcur_0164  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.94 
 
 
174 aa  43.9  0.001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1247  hypothetical protein  39.33 
 
 
148 aa  43.1  0.001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1263  response regulator receiver  33.59 
 
 
282 aa  42.4  0.002  Nocardioides sp. JS614  Bacteria  normal  0.0593741  n/a   
 
 
-
 
NC_007777  Francci3_0892  hypothetical protein  35 
 
 
195 aa  42.7  0.002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1003  protein serine phosphatase with GAF(s) sensor(s)  36.15 
 
 
549 aa  43.1  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  decreased coverage  0.00204881 
 
 
-
 
NC_013093  Amir_3607  hypothetical protein  31.15 
 
 
159 aa  42.4  0.002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4668  ATP-binding region ATPase domain protein  34.55 
 
 
148 aa  43.1  0.002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5624  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.79 
 
 
143 aa  42.4  0.002  Frankia sp. EAN1pec  Bacteria  hitchhiker  0.000415643  normal 
 
 
-
 
NC_013131  Caci_4098  protein serine phosphatase with GAF(s) sensor(s)  30.23 
 
 
1045 aa  42.4  0.003  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.108116 
 
 
-
 
NC_009486  Tpet_0196  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.88 
 
 
136 aa  42  0.003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0531  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.01 
 
 
207 aa  42  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.111836  normal 
 
 
-
 
NC_014211  Ndas_5041  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.1 
 
 
197 aa  42  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.486269 
 
 
-
 
NC_008009  Acid345_2317  putative anti-sigma regulatory factor, serine/threonine protein kinase  28.28 
 
 
155 aa  42  0.003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.128595  normal  0.13523 
 
 
-
 
NC_014210  Ndas_3499  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.22 
 
 
187 aa  42.4  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_1313  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.26 
 
 
135 aa  41.6  0.004  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0194  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.41 
 
 
136 aa  41.6  0.004  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7826  putative anti-sigma regulatory factor, serine/threonine protein kinase  29.37 
 
 
152 aa  42  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3638  protein serine/threonine phosphatase  36.27 
 
 
693 aa  41.2  0.005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.718947  normal  0.379759 
 
 
-
 
NC_014211  Ndas_5266  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.28 
 
 
204 aa  41.6  0.005  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0238  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.06 
 
 
295 aa  41.6  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.112494 
 
 
-
 
NC_009664  Krad_4122  Stage II sporulation E family protein  31.97 
 
 
805 aa  40.8  0.007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.530219  normal 
 
 
-
 
NC_013757  Gobs_0081  putative signal transduction histidine kinase  37.11 
 
 
150 aa  40.8  0.008  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.273591  n/a   
 
 
-
 
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  25.27 
 
 
147 aa  40.8  0.008  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
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