Gene Caci_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_1919 
Symbol 
ID8333262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp2175128 
End bp2175580 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content72% 
IMG OID644955068 
Productputative anti-sigma regulatory factor, serine/threonine protein kinase 
Protein accessionYP_003112680 
Protein GI256391116 
COG category[T] Signal transduction mechanisms 
COG ID[COG2172] Anti-sigma regulatory factor (Ser/Thr protein kinase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCGC GCCGGACGGC CCACACCCAG CTGGCGCCCG GGCCCTCGGC ACCGGCCGCC 
GCCCGGGCCT TCCTGACCGA GACCTGTACC AGGTGGCACG CTGAGGACTT CGTCACAGAC
GCCGCGCTCG TGGTCAGCGA ACTCATCACC AACGCCGTCC GGCACGCCGG CACCGAGATG
CGGCTGGAGC TGGAACTCGA TGACGGGATG CTGACGGTCC GGGTCCACGA CCGCAGTCCC
GGCCTGCCGC GCCTGATCCC GCCCTCCGAG CGCGTTTTCG GAGGTCAGGG GCTCGCGATC
GTGGTCCAGC TCGCCCAGGC CTGGGGGGTC GCGGTCGAGG ACGGCGGGGG AAAGGCCGTA
TGGTGCCGAC TCGGGCCGCG AGCAGCGGTA CCGGCTGGGG CGGGCACACA GGCGTCGCCG
TGGAAAGGGG AGCAGGACGT ATGGAGCGCG TGA
 
Protein sequence
MTSRRTAHTQ LAPGPSAPAA ARAFLTETCT RWHAEDFVTD AALVVSELIT NAVRHAGTEM 
RLELELDDGM LTVRVHDRSP GLPRLIPPSE RVFGGQGLAI VVQLAQAWGV AVEDGGGKAV
WCRLGPRAAV PAGAGTQASP WKGEQDVWSA