Gene Ndas_4246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4246 
Symbol 
ID9248120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5061238 
End bp5061732 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative signal transduction histidine kinase 
Protein accessionYP_003682141 
Protein GI297563167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.103074 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGA TGGGGGGCGA GCTGCCACGT CGGTGTGGAG CGGGCATTGG GACCGGGGTT 
CGCACGGCGT TCTTCGGGTC CGAGGTGACC CAGGCGGCGC AGATCCGCAG CTGGTGCCAG
CGAGGTGCGC GGGTGCAGGC CCACCTGGCC TTTCCCCTAG TGCTCGTGGT CAGTGAGCTG
GTGACCAACG CCTGGCTGCA CACCGCATCC GGAGCTCCCG GTGGCCGGGT GAAGATCCAG
ATGCGGCATC TTCCCGCCCG TCTCATCCAC CTGGCGGTCA CCGACGACGG CCCGCGACCG
GAACGGCCCG CATGCCTGCC CCGCCTGTCA CCGCACAGCG ACGACTTTCG CGTCGGTGGA
CGAGGTCTGC GCCTGGTGGA CCGCCTGTCT GTGCGGTGGG GCTGGACTGG CGAGCTCGGA
ACACCCCTGA CGGTATGGGC GCACATCAAC CCCTACGCGC CCGTCTCTGA CCACGACGAC
ACCGTCGCGG TCTGA
 
Protein sequence
MGAMGGELPR RCGAGIGTGV RTAFFGSEVT QAAQIRSWCQ RGARVQAHLA FPLVLVVSEL 
VTNAWLHTAS GAPGGRVKIQ MRHLPARLIH LAVTDDGPRP ERPACLPRLS PHSDDFRVGG
RGLRLVDRLS VRWGWTGELG TPLTVWAHIN PYAPVSDHDD TVAV