98 homologs were found in PanDaTox collection
for query gene Tfu_0704 on replicon NC_007333
Organism: Thermobifida fusca YX



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_0704  hypothetical protein  100 
 
 
176 aa  351  2e-96  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0976  hypothetical protein  69.48 
 
 
158 aa  207  5e-53  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0979  hypothetical protein  42.96 
 
 
201 aa  87.8  6e-17  Thermobifida fusca YX  Bacteria  normal  0.454512  n/a   
 
 
-
 
NC_013595  Sros_6480  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.9 
 
 
134 aa  65.1  0.0000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.903724  normal  0.217215 
 
 
-
 
NC_013595  Sros_7843  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.37 
 
 
137 aa  62  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.5414  normal 
 
 
-
 
NC_014211  Ndas_5037  putative signal transduction histidine kinase  34.19 
 
 
173 aa  61.2  0.000000007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.476889 
 
 
-
 
NC_013595  Sros_8367  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.24 
 
 
251 aa  60.8  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4499  ATP-binding region ATPase domain protein  33.79 
 
 
365 aa  58.9  0.00000003  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000991404  normal  0.031146 
 
 
-
 
NC_013510  Tcur_1448  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.44 
 
 
164 aa  58.5  0.00000005  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0047791  n/a   
 
 
-
 
NC_008578  Acel_2108  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.88 
 
 
151 aa  58.2  0.00000006  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.262944 
 
 
-
 
NC_013510  Tcur_4370  putative signal transduction histidine kinase  34.59 
 
 
134 aa  57.8  0.00000007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0095  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.03 
 
 
174 aa  57  0.0000001  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0391  hypothetical protein  40 
 
 
136 aa  57  0.0000001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1263  response regulator receiver  40.31 
 
 
282 aa  57.4  0.0000001  Nocardioides sp. JS614  Bacteria  normal  0.0593741  n/a   
 
 
-
 
NC_013510  Tcur_4605  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.68 
 
 
155 aa  55.8  0.0000003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3632  ATP-binding region ATPase domain protein  37.29 
 
 
161 aa  55.1  0.0000005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1416  putative anti-sigma regulatory factor, serine/threonine protein kinase  41.74 
 
 
151 aa  55.1  0.0000005  Thermomonospora curvata DSM 43183  Bacteria  normal  0.034656  n/a   
 
 
-
 
NC_014165  Tbis_1173  putative anti-sigma regulatory factor, serine/threonine protein kinase  39.84 
 
 
180 aa  54.7  0.0000006  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1739  PAS/protein phosphatase 2C-like  34.33 
 
 
817 aa  54.3  0.0000009  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4135  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.4 
 
 
188 aa  53.9  0.000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0743  putative PAS/PAC sensor protein  32.58 
 
 
855 aa  53.5  0.000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.565533 
 
 
-
 
NC_013510  Tcur_1945  putative anti-sigma regulatory factor, serine/threonine protein kinase  40.78 
 
 
142 aa  52.8  0.000002  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00291504  n/a   
 
 
-
 
NC_013131  Caci_6003  protein serine phosphatase with GAF(s) sensor(s)  34.97 
 
 
616 aa  52.8  0.000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.697266  normal  0.4865 
 
 
-
 
NC_014210  Ndas_4151  putative signal transduction histidine kinase  32.17 
 
 
183 aa  52.8  0.000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_4246  putative signal transduction histidine kinase  34.15 
 
 
164 aa  52.4  0.000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.103074 
 
 
-
 
NC_007777  Francci3_0400  putative signal transduction histidine kinase  32.45 
 
 
203 aa  52.8  0.000003  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_1327  putative anti-sigma regulatory factor, serine/threonine protein kinase  42.16 
 
 
211 aa  52.8  0.000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2295  hypothetical protein  39.2 
 
 
200 aa  52.4  0.000003  Thermobifida fusca YX  Bacteria  normal  0.147419  n/a   
 
 
-
 
NC_014165  Tbis_2744  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.56 
 
 
155 aa  52  0.000004  Thermobispora bispora DSM 43833  Bacteria  normal  0.813583  normal 
 
 
-
 
NC_014211  Ndas_5266  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.94 
 
 
204 aa  52  0.000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2967  hypothetical protein  32.56 
 
 
166 aa  52  0.000005  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35220  PAS domain S-box  34.9 
 
 
771 aa  51.6  0.000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2700  putative signal transduction histidine kinase  33.82 
 
 
207 aa  51.6  0.000006  Frankia sp. CcI3  Bacteria  normal  0.738661  normal  0.546363 
 
 
-
 
NC_007777  Francci3_2138  putative serine/threonine kinase anti-sigma factor  34.65 
 
 
155 aa  51.2  0.000007  Frankia sp. CcI3  Bacteria  normal  0.0220396  normal 
 
 
-
 
NC_007333  Tfu_2776  hypothetical protein  36.84 
 
 
137 aa  50.8  0.000009  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3612  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.03 
 
 
185 aa  50.8  0.000009  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2307  putative regulator  32.04 
 
 
181 aa  50.4  0.00001  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2966  protein serine/threonine phosphatase  34.85 
 
 
716 aa  50.4  0.00001  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.451872  normal 
 
 
-
 
NC_014165  Tbis_2480  putative anti-sigma regulatory factor, serine/threonine protein kinase  32.67 
 
 
159 aa  50.4  0.00001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.252056 
 
 
-
 
NC_007333  Tfu_1352  hypothetical protein  37.17 
 
 
145 aa  50.4  0.00001  Thermobifida fusca YX  Bacteria  normal  0.935548  n/a   
 
 
-
 
NC_013510  Tcur_1233  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.43 
 
 
151 aa  50.4  0.00001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.226283  n/a   
 
 
-
 
NC_007777  Francci3_2536  putative serine/threonine kinase anti-sigma factor  38.78 
 
 
199 aa  50.1  0.00002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0429  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.94 
 
 
196 aa  48.9  0.00003  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7294  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.71 
 
 
161 aa  49.3  0.00003  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1003  protein serine phosphatase with GAF(s) sensor(s)  35.86 
 
 
549 aa  48.9  0.00004  Kineococcus radiotolerans SRS30216  Bacteria  normal  decreased coverage  0.00204881 
 
 
-
 
NC_014210  Ndas_2770  putative signal transduction histidine kinase  34.92 
 
 
150 aa  48.5  0.00004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.416371  normal 
 
 
-
 
NC_013595  Sros_8758  putative anti-sigma regulatory factor, serine/threonine protein kinase  38.74 
 
 
192 aa  48.5  0.00005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013596  Sros_9396  putative anti-sigma regulatory factor, serine/threonine protein kinase  36.17 
 
 
171 aa  48.1  0.00006  Streptosporangium roseum DSM 43021  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3148  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.71 
 
 
146 aa  48.1  0.00006  Streptosporangium roseum DSM 43021  Bacteria  hitchhiker  0.00947281  normal 
 
 
-
 
NC_013530  Xcel_3140  protein serine/threonine phosphatase  34.53 
 
 
745 aa  48.1  0.00006  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.444013  n/a   
 
 
-
 
NC_014211  Ndas_5442  putative signal transduction histidine kinase  34.82 
 
 
167 aa  48.1  0.00007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7320  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.88 
 
 
288 aa  47  0.0001  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000252308  decreased coverage  0.00000000279842 
 
 
-
 
NC_013510  Tcur_1968  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.62 
 
 
216 aa  47.4  0.0001  Thermomonospora curvata DSM 43183  Bacteria  normal  0.075139  n/a   
 
 
-
 
NC_014210  Ndas_1650  putative signal transduction histidine kinase  34.92 
 
 
150 aa  47.4  0.0001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0223546  normal 
 
 
-
 
NC_009664  Krad_4080  protein serine phosphatase with GAF(s) sensor(s)  38.1 
 
 
738 aa  46.2  0.0002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.32388  normal 
 
 
-
 
NC_009380  Strop_4515  hypothetical protein  33.54 
 
 
176 aa  46.6  0.0002  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1873  putative signal transduction histidine kinase  34.13 
 
 
149 aa  46.2  0.0002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4525  putative anti-sigma regulatory factor, serine/threonine protein kinase  36 
 
 
130 aa  46.2  0.0002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_4051  putative serine/threonine kinase anti-sigma factor  33.6 
 
 
281 aa  45.8  0.0003  Frankia sp. CcI3  Bacteria  normal  0.932154  normal 
 
 
-
 
NC_013131  Caci_8587  putative signal transduction histidine kinase  31.72 
 
 
158 aa  45.8  0.0003  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.00197112  normal  0.613164 
 
 
-
 
NC_014210  Ndas_2582  putative signal transduction histidine kinase  34.13 
 
 
150 aa  45.8  0.0003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.0114014 
 
 
-
 
NC_014165  Tbis_0038  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.38 
 
 
151 aa  45.4  0.0004  Thermobispora bispora DSM 43833  Bacteria  normal  0.536506  normal 
 
 
-
 
NC_013595  Sros_5629  putative signal transduction histidine kinase  34.82 
 
 
167 aa  45.4  0.0004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.56187 
 
 
-
 
NC_013510  Tcur_0874  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.29 
 
 
205 aa  45.1  0.0005  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1919  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.45 
 
 
150 aa  45.1  0.0005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_1247  hypothetical protein  31.71 
 
 
148 aa  44.7  0.0006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0519  putative signal transduction histidine kinase  35.85 
 
 
165 aa  44.7  0.0007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_0664  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.92 
 
 
147 aa  44.7  0.0007  Frankia sp. EAN1pec  Bacteria  normal  normal  0.535186 
 
 
-
 
NC_013510  Tcur_2543  hypothetical protein  33.1 
 
 
155 aa  44.7  0.0007  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000143777  n/a   
 
 
-
 
NC_013093  Amir_0969  hypothetical protein  30.25 
 
 
144 aa  44.7  0.0008  Actinosynnema mirum DSM 43827  Bacteria  normal  0.645052  n/a   
 
 
-
 
NC_014165  Tbis_0025  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.58 
 
 
226 aa  44.3  0.0009  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0019  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.72 
 
 
255 aa  44.3  0.0009  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5041  putative anti-sigma regulatory factor, serine/threonine protein kinase  35.62 
 
 
197 aa  44.3  0.001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.486269 
 
 
-
 
NC_014165  Tbis_1228  putative signal transduction histidine kinase  34.55 
 
 
169 aa  43.5  0.001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.141602 
 
 
-
 
NC_009921  Franean1_2634  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.86 
 
 
227 aa  43.5  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4122  Stage II sporulation E family protein  33.07 
 
 
805 aa  43.1  0.002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.530219  normal 
 
 
-
 
NC_007777  Francci3_0892  hypothetical protein  32.77 
 
 
195 aa  42.7  0.002  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4085  putative signal transduction histidine kinase  40 
 
 
160 aa  43.5  0.002  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4098  protein serine phosphatase with GAF(s) sensor(s)  31.01 
 
 
1045 aa  43.5  0.002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.108116 
 
 
-
 
NC_009380  Strop_4104  stage II sporulation E family protein  31.62 
 
 
694 aa  42.4  0.003  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013223  Dret_1522  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.37 
 
 
147 aa  42.7  0.003  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0918  putative serine/threonine kinase anti-sigma factor  32.59 
 
 
142 aa  42.4  0.003  Frankia sp. CcI3  Bacteria  normal  0.283269  normal 
 
 
-
 
NC_014210  Ndas_0305  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.97 
 
 
184 aa  42.4  0.003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.12283  normal  0.285434 
 
 
-
 
NC_009486  Tpet_0196  putative anti-sigma regulatory factor, serine/threonine protein kinase  27.08 
 
 
136 aa  42.4  0.003  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_2418  protein serine/threonine phosphatase  33.56 
 
 
746 aa  42.4  0.003  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.724517 
 
 
-
 
NC_013595  Sros_2511  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.55 
 
 
130 aa  42.4  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.55888  normal  0.653712 
 
 
-
 
NC_014211  Ndas_5447  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.37 
 
 
178 aa  42  0.004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.279977  normal 
 
 
-
 
NC_013131  Caci_0238  putative anti-sigma regulatory factor, serine/threonine protein kinase  30.83 
 
 
295 aa  41.6  0.005  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.112494 
 
 
-
 
NC_014210  Ndas_0531  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.13 
 
 
207 aa  41.6  0.006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.111836  normal 
 
 
-
 
NC_013093  Amir_3607  hypothetical protein  29.66 
 
 
159 aa  41.6  0.006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0168  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.58 
 
 
149 aa  41.2  0.007  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.129671  normal 
 
 
-
 
NC_014210  Ndas_3499  putative anti-sigma regulatory factor, serine/threonine protein kinase  31.85 
 
 
187 aa  41.2  0.007  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_0374  putative anti-sigma regulatory factor, serine/threonine protein kinase  26.97 
 
 
248 aa  41.2  0.007  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_6464  ATP-binding region ATPase domain-containing protein  32.76 
 
 
164 aa  40.8  0.01  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.675812 
 
 
-
 
NC_013093  Amir_3236  putative anti-sigma regulatory factor, serine/threonine protein kinase  37.5 
 
 
137 aa  40.8  0.01  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1655  hypothetical protein  31.15 
 
 
162 aa  40.8  0.01  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0164  putative anti-sigma regulatory factor, serine/threonine protein kinase  33.62 
 
 
174 aa  40.8  0.01  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0348  putative anti-sigma regulatory factor, serine/threonine protein kinase  34.69 
 
 
147 aa  40.8  0.01  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>