Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_3638 |
Symbol | |
ID | 7860980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 4050266 |
End bp | 4052347 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643867741 |
Product | protein serine/threonine phosphatase |
Protein accession | YP_002883642 |
Protein GI | 229822116 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.718947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.379759 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGACCA CCACACCCGC GTCGGGCGAC GAGTTCACGC CCGAGGAGTT CTTCACGACC TTCGCCGCGA GCGACGTCGC GTTCTTCGTG CTCGACGTCG TCGACGGCGA GCCGAGGATC CCGTGGGTGA ACCGCGGCTT CACCGAGCTG ACCGGCCACG ACCTCGACGC GCTGCGCCAC GACGCGCGCG CGATCTTCAA CGGGATGCCG GAGAAGTCGG CGCGGGACAG CTTCAAGCGC TCGGTCCTCG ACGGCGACGG GCTGATGATC CGAGCCCTGT GCTACACGCG CGACGGCGCC CCGTTCTGGG GCCGGTTCGT CATCAGCCCG GTGCGGCCCG GCCGAGCGAT CATCGCGCTG CGCGACATCA CCGACGACAT GCGGGCACTC GACGACGACG CGATGCTCTT CGTGACGGAG CGGCGGGTCC GTCTCGGCCT GGACGCGGTC TCGCGCGTGT CCGACCTGCT CATCGACGTC GAGGACGCCG GCACGCTGCG CGCCGTCACC CACCTGCTCT CCGGCGTCGT CGTGCGGTGG AGCGCCTTCT TCGCCGCCGA CGGCGGGATG CACCCGATCG ACGGGCTCGA GCCGTCGTCG TCGGACCGGC GCGGACGGTC GATCTGGCAC GGGTCGCCCG ATCCGGTGCT GCGGCTCCTC GAGGGCTCCA GGGTGGAGGA GATCGAGCTC TCCCTCGAGG AGGAACCGGC GCCGTTCACG GCCACCGGCG ACCTCGTCAC GGCCCTGCGC AGGCACGCTG ACCTGCCCGA CGACGTCACG AGCGTCGTCG TCCTGCCCGT CCTCGGGCGG GTGGAGAGTC TCGGCGTCAT GGTGCTCGTC CCGCTCGAGG ACGCCGACGG CCGGCACACC GTCGCGCGTC TGGTCGCGCG GCGGGTGGGG ATGGCGATCG AGAACGCCCG CCTCCTGCAG CGCGAGCACC TCATGGCCGA GACGCTGCAG CGGGCGATGC TGCCGGAGCA GGCCGAGGTC ACGGGCCTCG ACGTGTGGAC CTACTACTCC CCGAACGCGG AGCACGCCCA GGTCGGCGGC GACTGGTACG ACGTGCTCTA CGTGAACCCG GACACCGTCG GCGTGGTGGT GGGGGACGTC GTCGGGCACG ACATGGAGGC GGCTGCGGCG ATGGGCCAGC TGCGTTCCGT CGTCCGCTCC TACGCCTGCG AGCTGGTGGA CCCCGGGACG GTGCTGTCGC GGGTCGACGA CCTCGTGGCC AGCATGCGCC TGGCCCGGTC GGCGTCGCTC GTGTACGGGG CGCTCACCCC GGTCGATCAG GAGTCGGGCC GCTGGCGCTT CGACTACTCA CGAGCGGGCC ACATGCCGCC GCTCCTCGTC CGGGACGGTG AGGTGACGCA GCTCGACGGC GCCGCCGGGG TGCTCGTCGG GTTCGGTTCC GTGCGCCGCG CGACGGCGGG GGTCGACCTC GTCGCCGGCG ACGTCCTGGT GTTCTACACG GACGGGCTCG TCGAGCGGCG CGCCCGGGCA CTGCGGGCCG GCATCGCCGA GCTCGTCGAG ACCTGCCGGA CACTCGGGGC GAACGGCGCC GACGACGCCG CGGGCGTGGG GGAGGCGCTG CTCGCGGCGT TCGCCGAGGA GCCGGAGGAC GACGTCGCGA TCGTCGTCGT GCGCATCCCG CGGTGCGACC AGCGAGAGAT CGACCCGGGC GTGCGCTCGT GGCGGATCGA GCTGGAGCCG GACGTGCGGT CCACCGCACG GGCTCGCGAG GCGGTCGTGC GCGTGTGCGA CGAGTGGGGA GTCCGGGACG CCCCGGCGGC CGAGCTCGTC ACGTCCGAGC TGGTCGCGAA CGCCGTGATG CACGGGTGGG GCAGGGTGGC GCTCCGGCTG CGCGCGACGT CGTCAGGGCT GCGCGTCGAG GTCGAGGACG GCAACCCCAC GCCACCGACG CTCCTCGGCG GTCACGCCAG CGGTCTCGGC GGGTTCGGCA TGCAGATCGT GGAGCGGCTG GCGGACTGGG GCTGGCGCCC GTCCGGCCAC GGCAAGGTCG TGTGGGCGCT CGTGCGCCCG CGCTCGGGCG AGGAGGACCC GCTGGCGGGA CTTCGCGGGT GA
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Protein sequence | MTTTTPASGD EFTPEEFFTT FAASDVAFFV LDVVDGEPRI PWVNRGFTEL TGHDLDALRH DARAIFNGMP EKSARDSFKR SVLDGDGLMI RALCYTRDGA PFWGRFVISP VRPGRAIIAL RDITDDMRAL DDDAMLFVTE RRVRLGLDAV SRVSDLLIDV EDAGTLRAVT HLLSGVVVRW SAFFAADGGM HPIDGLEPSS SDRRGRSIWH GSPDPVLRLL EGSRVEEIEL SLEEEPAPFT ATGDLVTALR RHADLPDDVT SVVVLPVLGR VESLGVMVLV PLEDADGRHT VARLVARRVG MAIENARLLQ REHLMAETLQ RAMLPEQAEV TGLDVWTYYS PNAEHAQVGG DWYDVLYVNP DTVGVVVGDV VGHDMEAAAA MGQLRSVVRS YACELVDPGT VLSRVDDLVA SMRLARSASL VYGALTPVDQ ESGRWRFDYS RAGHMPPLLV RDGEVTQLDG AAGVLVGFGS VRRATAGVDL VAGDVLVFYT DGLVERRARA LRAGIAELVE TCRTLGANGA DDAAGVGEAL LAAFAEEPED DVAIVVVRIP RCDQREIDPG VRSWRIELEP DVRSTARARE AVVRVCDEWG VRDAPAAELV TSELVANAVM HGWGRVALRL RATSSGLRVE VEDGNPTPPT LLGGHASGLG GFGMQIVERL ADWGWRPSGH GKVVWALVRP RSGEEDPLAG LRG
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