Gene Bcav_3638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3638 
Symbol 
ID7860980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4050266 
End bp4052347 
Gene Length2082 bp 
Protein Length693 aa 
Translation table11 
GC content73% 
IMG OID643867741 
Productprotein serine/threonine phosphatase 
Protein accessionYP_002883642 
Protein GI229822116 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.718947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.379759 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCA CCACACCCGC GTCGGGCGAC GAGTTCACGC CCGAGGAGTT CTTCACGACC 
TTCGCCGCGA GCGACGTCGC GTTCTTCGTG CTCGACGTCG TCGACGGCGA GCCGAGGATC
CCGTGGGTGA ACCGCGGCTT CACCGAGCTG ACCGGCCACG ACCTCGACGC GCTGCGCCAC
GACGCGCGCG CGATCTTCAA CGGGATGCCG GAGAAGTCGG CGCGGGACAG CTTCAAGCGC
TCGGTCCTCG ACGGCGACGG GCTGATGATC CGAGCCCTGT GCTACACGCG CGACGGCGCC
CCGTTCTGGG GCCGGTTCGT CATCAGCCCG GTGCGGCCCG GCCGAGCGAT CATCGCGCTG
CGCGACATCA CCGACGACAT GCGGGCACTC GACGACGACG CGATGCTCTT CGTGACGGAG
CGGCGGGTCC GTCTCGGCCT GGACGCGGTC TCGCGCGTGT CCGACCTGCT CATCGACGTC
GAGGACGCCG GCACGCTGCG CGCCGTCACC CACCTGCTCT CCGGCGTCGT CGTGCGGTGG
AGCGCCTTCT TCGCCGCCGA CGGCGGGATG CACCCGATCG ACGGGCTCGA GCCGTCGTCG
TCGGACCGGC GCGGACGGTC GATCTGGCAC GGGTCGCCCG ATCCGGTGCT GCGGCTCCTC
GAGGGCTCCA GGGTGGAGGA GATCGAGCTC TCCCTCGAGG AGGAACCGGC GCCGTTCACG
GCCACCGGCG ACCTCGTCAC GGCCCTGCGC AGGCACGCTG ACCTGCCCGA CGACGTCACG
AGCGTCGTCG TCCTGCCCGT CCTCGGGCGG GTGGAGAGTC TCGGCGTCAT GGTGCTCGTC
CCGCTCGAGG ACGCCGACGG CCGGCACACC GTCGCGCGTC TGGTCGCGCG GCGGGTGGGG
ATGGCGATCG AGAACGCCCG CCTCCTGCAG CGCGAGCACC TCATGGCCGA GACGCTGCAG
CGGGCGATGC TGCCGGAGCA GGCCGAGGTC ACGGGCCTCG ACGTGTGGAC CTACTACTCC
CCGAACGCGG AGCACGCCCA GGTCGGCGGC GACTGGTACG ACGTGCTCTA CGTGAACCCG
GACACCGTCG GCGTGGTGGT GGGGGACGTC GTCGGGCACG ACATGGAGGC GGCTGCGGCG
ATGGGCCAGC TGCGTTCCGT CGTCCGCTCC TACGCCTGCG AGCTGGTGGA CCCCGGGACG
GTGCTGTCGC GGGTCGACGA CCTCGTGGCC AGCATGCGCC TGGCCCGGTC GGCGTCGCTC
GTGTACGGGG CGCTCACCCC GGTCGATCAG GAGTCGGGCC GCTGGCGCTT CGACTACTCA
CGAGCGGGCC ACATGCCGCC GCTCCTCGTC CGGGACGGTG AGGTGACGCA GCTCGACGGC
GCCGCCGGGG TGCTCGTCGG GTTCGGTTCC GTGCGCCGCG CGACGGCGGG GGTCGACCTC
GTCGCCGGCG ACGTCCTGGT GTTCTACACG GACGGGCTCG TCGAGCGGCG CGCCCGGGCA
CTGCGGGCCG GCATCGCCGA GCTCGTCGAG ACCTGCCGGA CACTCGGGGC GAACGGCGCC
GACGACGCCG CGGGCGTGGG GGAGGCGCTG CTCGCGGCGT TCGCCGAGGA GCCGGAGGAC
GACGTCGCGA TCGTCGTCGT GCGCATCCCG CGGTGCGACC AGCGAGAGAT CGACCCGGGC
GTGCGCTCGT GGCGGATCGA GCTGGAGCCG GACGTGCGGT CCACCGCACG GGCTCGCGAG
GCGGTCGTGC GCGTGTGCGA CGAGTGGGGA GTCCGGGACG CCCCGGCGGC CGAGCTCGTC
ACGTCCGAGC TGGTCGCGAA CGCCGTGATG CACGGGTGGG GCAGGGTGGC GCTCCGGCTG
CGCGCGACGT CGTCAGGGCT GCGCGTCGAG GTCGAGGACG GCAACCCCAC GCCACCGACG
CTCCTCGGCG GTCACGCCAG CGGTCTCGGC GGGTTCGGCA TGCAGATCGT GGAGCGGCTG
GCGGACTGGG GCTGGCGCCC GTCCGGCCAC GGCAAGGTCG TGTGGGCGCT CGTGCGCCCG
CGCTCGGGCG AGGAGGACCC GCTGGCGGGA CTTCGCGGGT GA
 
Protein sequence
MTTTTPASGD EFTPEEFFTT FAASDVAFFV LDVVDGEPRI PWVNRGFTEL TGHDLDALRH 
DARAIFNGMP EKSARDSFKR SVLDGDGLMI RALCYTRDGA PFWGRFVISP VRPGRAIIAL
RDITDDMRAL DDDAMLFVTE RRVRLGLDAV SRVSDLLIDV EDAGTLRAVT HLLSGVVVRW
SAFFAADGGM HPIDGLEPSS SDRRGRSIWH GSPDPVLRLL EGSRVEEIEL SLEEEPAPFT
ATGDLVTALR RHADLPDDVT SVVVLPVLGR VESLGVMVLV PLEDADGRHT VARLVARRVG
MAIENARLLQ REHLMAETLQ RAMLPEQAEV TGLDVWTYYS PNAEHAQVGG DWYDVLYVNP
DTVGVVVGDV VGHDMEAAAA MGQLRSVVRS YACELVDPGT VLSRVDDLVA SMRLARSASL
VYGALTPVDQ ESGRWRFDYS RAGHMPPLLV RDGEVTQLDG AAGVLVGFGS VRRATAGVDL
VAGDVLVFYT DGLVERRARA LRAGIAELVE TCRTLGANGA DDAAGVGEAL LAAFAEEPED
DVAIVVVRIP RCDQREIDPG VRSWRIELEP DVRSTARARE AVVRVCDEWG VRDAPAAELV
TSELVANAVM HGWGRVALRL RATSSGLRVE VEDGNPTPPT LLGGHASGLG GFGMQIVERL
ADWGWRPSGH GKVVWALVRP RSGEEDPLAG LRG