More than 300 homologs were found in PanDaTox collection
for query gene Franean1_3018 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008705  Mkms_2662  acyl-CoA dehydrogenase domain-containing protein  54.08 
 
 
611 aa  649    Mycobacterium sp. KMS  Bacteria  normal  0.139362  normal 
 
 
-
 
NC_013169  Ksed_26500  acyl-CoA dehydrogenase  60.55 
 
 
617 aa  735    Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.348729 
 
 
-
 
NC_008726  Mvan_0265  acyl-CoA dehydrogenase domain-containing protein  62.85 
 
 
611 aa  775    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.746207  normal  0.13974 
 
 
-
 
NC_013235  Namu_5295  acyl-CoA dehydrogenase domain protein  64.25 
 
 
621 aa  797    Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0238  acyl-CoA dehydrogenase domain-containing protein  59.25 
 
 
611 aa  730    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.138949 
 
 
-
 
NC_009338  Mflv_0409  acyl-CoA dehydrogenase domain-containing protein  62.52 
 
 
611 aa  780    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0268074 
 
 
-
 
NC_008705  Mkms_1531  acyl-CoA dehydrogenase domain-containing protein  57.4 
 
 
615 aa  692    Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_2647  acyl-CoA dehydrogenase domain-containing protein  53.92 
 
 
611 aa  645    Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0210  putative acyl-CoA dehydrogenase  67.16 
 
 
607 aa  817    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_0089  acyl-CoA dehydrogenase domain-containing protein  59.52 
 
 
617 aa  719    Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0430  acyl-CoA dehydrogenase domain-containing protein  59.41 
 
 
611 aa  729    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.377352 
 
 
-
 
NC_009077  Mjls_0232  acyl-CoA dehydrogenase domain-containing protein  62.36 
 
 
611 aa  766    Mycobacterium sp. JLS  Bacteria  normal  normal  0.235095 
 
 
-
 
NC_014158  Tpau_0434  acyl-CoA dehydrogenase domain protein  57.84 
 
 
610 aa  687    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10247  acyl-CoA dehydrogenase fadE5  62.68 
 
 
611 aa  759    Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4833  acyl-CoA dehydrogenase domain protein  63.41 
 
 
614 aa  770    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11495  acyl-CoA dehydrogenase fadE15  58.1 
 
 
609 aa  699    Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000000443492  normal  0.167351 
 
 
-
 
NC_013093  Amir_6963  acyl-CoA dehydrogenase domain protein  63.9 
 
 
612 aa  806    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0053  acyl-CoA dehydrogenase-like  80.13 
 
 
614 aa  1033    Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8827  acyl-CoA dehydrogenase domain protein  60.16 
 
 
609 aa  741    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3327  acyl-CoA dehydrogenase domain-containing protein  68.74 
 
 
610 aa  870    Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.429773 
 
 
-
 
NC_009953  Sare_0086  acyl-CoA dehydrogenase domain-containing protein  60.13 
 
 
617 aa  724    Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0567626 
 
 
-
 
NC_013441  Gbro_4420  acyl-CoA dehydrogenase domain protein  61.05 
 
 
611 aa  763    Gordonia bronchialis DSM 43247  Bacteria  normal  0.921318  n/a   
 
 
-
 
NC_013510  Tcur_0271  acyl-CoA dehydrogenase domain protein  64.92 
 
 
610 aa  831    Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8960  acyl-CoA dehydrogenase  64.86 
 
 
607 aa  809    Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5441  acyl-CoA dehydrogenase domain protein  63.71 
 
 
605 aa  788    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7271  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
609 aa  1240    Frankia sp. EAN1pec  Bacteria  normal  normal  0.319436 
 
 
-
 
NC_008705  Mkms_0252  acyl-CoA dehydrogenase domain-containing protein  62.68 
 
 
611 aa  769    Mycobacterium sp. KMS  Bacteria  normal  normal  0.104888 
 
 
-
 
NC_008146  Mmcs_0242  acyl-CoA dehydrogenase-like protein  62.68 
 
 
611 aa  769    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1508  acyl-CoA dehydrogenase-like protein  57.4 
 
 
615 aa  692    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2618  acyl-CoA dehydrogenase-like protein  54.08 
 
 
611 aa  649    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4429  acyl-CoA dehydrogenase domain-containing protein  60.77 
 
 
621 aa  745    Nocardioides sp. JS614  Bacteria  decreased coverage  0.00413349  n/a   
 
 
-
 
NC_013159  Svir_38750  acyl-CoA dehydrogenase  65.64 
 
 
614 aa  821    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.802749  normal 
 
 
-
 
NC_013947  Snas_5917  acyl-CoA dehydrogenase domain-containing protein  58.83 
 
 
616 aa  701    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_3018  acyl-CoA dehydrogenase domain-containing protein  100 
 
 
619 aa  1259    Frankia sp. EAN1pec  Bacteria  normal  0.238191  normal 
 
 
-
 
NC_009077  Mjls_1508  acyl-CoA dehydrogenase domain-containing protein  57.47 
 
 
633 aa  598  1e-169  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  36.87 
 
 
601 aa  376  1e-103  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  36.03 
 
 
604 aa  374  1e-102  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000712718  n/a   
 
 
-
 
NC_013440  Hoch_5060  acyl-CoA dehydrogenase domain protein  37.18 
 
 
609 aa  369  1e-101  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  36.11 
 
 
605 aa  357  3.9999999999999996e-97  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_007517  Gmet_2270  Acyl-CoA dehydrogenase-like  34.76 
 
 
615 aa  333  4e-90  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000247308  hitchhiker  0.000246655 
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  37.58 
 
 
596 aa  332  1e-89  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  34.96 
 
 
597 aa  328  2.0000000000000001e-88  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  34.96 
 
 
597 aa  328  2.0000000000000001e-88  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  35.5 
 
 
595 aa  328  2.0000000000000001e-88  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  36.67 
 
 
595 aa  327  4.0000000000000003e-88  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  36.3 
 
 
595 aa  327  6e-88  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  35.01 
 
 
599 aa  326  7e-88  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  34.24 
 
 
594 aa  325  1e-87  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  35.07 
 
 
595 aa  325  1e-87  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  34.9 
 
 
598 aa  324  2e-87  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  34.47 
 
 
597 aa  324  3e-87  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  35.33 
 
 
596 aa  323  4e-87  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  35.24 
 
 
597 aa  323  6e-87  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  35.71 
 
 
595 aa  323  6e-87  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
595 aa  322  9.999999999999999e-87  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
595 aa  322  9.999999999999999e-87  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.31 
 
 
598 aa  322  9.999999999999999e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
595 aa  322  9.999999999999999e-87  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
595 aa  322  9.999999999999999e-87  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  34.91 
 
 
595 aa  322  1.9999999999999998e-86  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1557  acyl-CoA dehydrogenase-like  33.71 
 
 
593 aa  321  1.9999999999999998e-86  Ruegeria sp. TM1040  Bacteria  normal  normal  0.538695 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  35.02 
 
 
595 aa  322  1.9999999999999998e-86  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
595 aa  321  3e-86  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_011757  Mchl_3569  acyl-CoA dehydrogenase domain protein  35.92 
 
 
596 aa  321  3e-86  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.452125 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  35.23 
 
 
595 aa  321  3e-86  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  35.78 
 
 
591 aa  321  3e-86  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
595 aa  321  3e-86  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  35.93 
 
 
595 aa  320  3.9999999999999996e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_5032  acyl-CoA dehydrogenase domain protein  37.17 
 
 
601 aa  319  7e-86  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.690717 
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  34.72 
 
 
595 aa  319  7.999999999999999e-86  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_010172  Mext_3245  acyl-CoA dehydrogenase domain-containing protein  35.76 
 
 
596 aa  319  7.999999999999999e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.532993  normal  0.0328142 
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  35.06 
 
 
595 aa  318  1e-85  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  35.06 
 
 
595 aa  318  1e-85  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  35.06 
 
 
595 aa  318  1e-85  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_3441  acyl-CoA dehydrogenase domain protein  35.82 
 
 
596 aa  319  1e-85  Methylobacterium populi BJ001  Bacteria  normal  0.189286  normal 
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  36.75 
 
 
596 aa  319  1e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_008752  Aave_4089  acyl-CoA dehydrogenase domain-containing protein  36.62 
 
 
601 aa  318  2e-85  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  36.21 
 
 
595 aa  317  3e-85  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  34.9 
 
 
595 aa  317  4e-85  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_2431  acyl-CoA dehydrogenase-like protein  37.18 
 
 
603 aa  316  7e-85  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  34.41 
 
 
598 aa  316  8e-85  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  35.23 
 
 
592 aa  314  1.9999999999999998e-84  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  34.85 
 
 
596 aa  314  1.9999999999999998e-84  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
NC_008781  Pnap_3477  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
598 aa  314  2.9999999999999996e-84  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.865632 
 
 
-
 
NC_008048  Sala_1537  acyl-CoA dehydrogenase-like protein  33.77 
 
 
600 aa  314  2.9999999999999996e-84  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.564403  normal 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  35.61 
 
 
597 aa  313  6.999999999999999e-84  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_008687  Pden_2868  acyl-CoA dehydrogenase domain-containing protein  34.64 
 
 
592 aa  313  6.999999999999999e-84  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.259312 
 
 
-
 
NC_010505  Mrad2831_5758  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
595 aa  313  6.999999999999999e-84  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0815  putative acyl-CoA dehydrogenase  33.28 
 
 
596 aa  313  6.999999999999999e-84  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.809407 
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  34.91 
 
 
598 aa  313  9e-84  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  34.61 
 
 
619 aa  312  1e-83  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_009511  Swit_3797  acyl-CoA dehydrogenase domain-containing protein  33.44 
 
 
596 aa  311  2e-83  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.163707 
 
 
-
 
NC_012792  Vapar_5356  acyl-CoA dehydrogenase domain protein  35.88 
 
 
592 aa  311  2e-83  Variovorax paradoxus S110  Bacteria  normal  0.253086  n/a   
 
 
-
 
NC_007298  Daro_0227  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  35.08 
 
 
592 aa  311  2.9999999999999997e-83  Dechloromonas aromatica RCB  Bacteria  normal  0.100884  normal 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  34.28 
 
 
596 aa  311  2.9999999999999997e-83  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  36.03 
 
 
596 aa  310  5e-83  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  33.76 
 
 
598 aa  308  1.0000000000000001e-82  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_009484  Acry_1573  acyl-CoA dehydrogenase domain-containing protein  36.79 
 
 
599 aa  309  1.0000000000000001e-82  Acidiphilium cryptum JF-5  Bacteria  normal  0.77864  n/a   
 
 
-
 
NC_010002  Daci_2393  acyl-CoA dehydrogenase domain-containing protein  35.46 
 
 
596 aa  309  1.0000000000000001e-82  Delftia acidovorans SPH-1  Bacteria  normal  0.687624  normal 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  35.44 
 
 
598 aa  308  1.0000000000000001e-82  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
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