Gene Mjls_1508 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_1508 
Symbol 
ID4877241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp1612398 
End bp1614299 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content66% 
IMG OID640138814 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001069798 
Protein GI126434107 
COG category[H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCATT ACCGAAGCAA CCTGCGTGAC GTCGAGTTCA ACCTGTTCGA GCTACTCGAA 
CGCGACCGCC TCTTCGGCGC GCAACCGTAC GGGGACATCG ACCTCGACAC CGCGAAGTTC
ATCCTCCGTG AGGTGGACCG GCTCGCGCGC GAGGATCTCG CGGCATCGTT CGAAGAAGCT
GATCGTCACC CTCCGGTCTA CGATCCGTCG ACCCGATCCG TCACGGTCAC GCCCGAGTTC
GGCGGCGCAT ACAAGACATG GATGGACGCC GAGTGGTGGC GCCTGCGAGT ACTCCCCGAA
CTGGGCGGTA CCGACGCCCC CAATTCGCTC AACTGGGCAC TGGCGGAGTT TGTCCTCGGG
GCGAACCCCG CGTTGTGGAC ATATGTCGGC ATGCCGACCG CCGCGCGGGT GGTCTGGCGC
CACGGCACCG AGCGGGACCG CAAGATCGCC CAGATCGGCG TCGAGAAGCG CTGGGGCGCA
ACCATGGTGC TGACCGAGCC GGACGCCGGT TCTGATGTCG GAGCGGGTCG CACCCGCGCC
GTCCCCAACG ACGACGGCAC CTGGAACATC CACGGCGTCA AGCGGTTCAT CACCGCAGGC
GAGCACGACC TGGCGGACAA CATCCTCCAC CTCGTCCTGG CCAGGCCCGT CGGTGTCGAC
GGCGTCGGCG GTCCCGGTAC CAAGGGGCTC AGCCTCTTCC TCGTCCCGAA GTTCCACTTC
GATCCGGACA CCGGCGAACT CACCGGTGAG CGAAACGGCG TGTACGCCAA CAACGTCGAG
AAGAAGATGG GCATGAACGT GTCCACGACG TGCGAGTTGA CGCTCGGCGA CGATGCTCCG
GCGCGAGGGT GGCTGCTGGG TGAGGTGCAC GACGGTATCG CGCAGATGTT CGAGGTGATC
GAGGACGCGC GGATGATGGT CGGTTGCAAG GCGATCGCCA CCTTGTCGAG CGGCTACCTC
AACGCCCTGG ACTACGCCAA GCAGCGCGTG CAGGGTGCGG ATCTCGCGCA GATGTCGGAC
AAGTCGGCGC CCCGCGTCAC CATCACCCGC CACCCGGATG TCAGGCGTTC ACTGCTCACG
CAGAAGGCTT TCGCCGAGGG CATGCGGTCG TTGGTCCTCT ACACCGCTTC GTGGCAGGAC
GAGATCGCGG TGAAGACGGC CGCGGGCGAG GACACCGCGT TGGCCGAAGC CGTCAACGAT
CTGCTCCTGC CGATCGTGAA AGGTTACGGG TCGGAACGGT CGTGGGTGGT CCTGGGCACC
GAATCGCTGC AGACCTTCGG CGGATCGGGC TATCTGCGCG AGTATCCCAT CGAGCAGTAC
GTTCGTGATG CCAAGATCGA CACGGTTTAT GAGGGGACGA CCGCGATCCA GGCCCAGGAC
CTGTTCTTCC GCAAGATCGT TCGCAACAGG AGCGTGGCAC TGACGCACCT GTTGGACGAG
GTCAAGGCCT TCGCCGCCGC ATCCGATCCG GCGTCGCCGA TCACCGGCGA ACGCCGACTT
CTGGGGGATG CGGTCTCGAA CGTCGAGGCG ATCGTCGCGA AGATGACAAG CGACCTCGCC
GCCTCCAAAG ATGAGTCCAC CGGTATCTCC GGACAGGCTC GGGCGCAGAC GCTGCGCGCG
CTCGGATCAG CGCAGACGAC CCCGGAAGAT CTGGTCCGGC CCGGCCATGT GTTGCCGGTC
CGGTGTCCAC ACGTGCCGCG CAACGCACAG GATCTGGTGT GGGACAGGAT GGTCCGCATA
GTCGAGCGGG CCGGGTGCAC ACCGGTGGCT GCGGCGTGCC GGCTGGTGCA CGACTCGGGC
GACGTACTCG ACGACGCGGC AGCCGAGGAT TTCGCGGCCA CCTTCGGGTT GGCGCTGGTG
TCGGCGCCAC AACGGGTCCG GGTACTGGCC GCAGGCGCCT AA
 
Protein sequence
MGHYRSNLRD VEFNLFELLE RDRLFGAQPY GDIDLDTAKF ILREVDRLAR EDLAASFEEA 
DRHPPVYDPS TRSVTVTPEF GGAYKTWMDA EWWRLRVLPE LGGTDAPNSL NWALAEFVLG
ANPALWTYVG MPTAARVVWR HGTERDRKIA QIGVEKRWGA TMVLTEPDAG SDVGAGRTRA
VPNDDGTWNI HGVKRFITAG EHDLADNILH LVLARPVGVD GVGGPGTKGL SLFLVPKFHF
DPDTGELTGE RNGVYANNVE KKMGMNVSTT CELTLGDDAP ARGWLLGEVH DGIAQMFEVI
EDARMMVGCK AIATLSSGYL NALDYAKQRV QGADLAQMSD KSAPRVTITR HPDVRRSLLT
QKAFAEGMRS LVLYTASWQD EIAVKTAAGE DTALAEAVND LLLPIVKGYG SERSWVVLGT
ESLQTFGGSG YLREYPIEQY VRDAKIDTVY EGTTAIQAQD LFFRKIVRNR SVALTHLLDE
VKAFAAASDP ASPITGERRL LGDAVSNVEA IVAKMTSDLA ASKDESTGIS GQARAQTLRA
LGSAQTTPED LVRPGHVLPV RCPHVPRNAQ DLVWDRMVRI VERAGCTPVA AACRLVHDSG
DVLDDAAAED FAATFGLALV SAPQRVRVLA AGA