| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_7271 |
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| Symbol | |
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| ID | 5675572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 8875864 |
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| End bp | 8877693 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641246108 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001511496 |
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| Protein GI | 158318988 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.319436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCACT ACCGGAGCAA TCTCCGCGAC ATCGAGTTCA ACCTGTTCGA GGTGTTCGGC
GTGGACCGGA CGCTCGGGAC CGGGCCCTTC GCGGAGATGG ACCGCGACAC AGCGCATGAG
GTGCTCGCCG AGCTGGAGCG GGTCGCCGTC GGGCCGATCG CCGAGTCCTT CGAGGACGCC
GACCGGCACC CGCCGACACT CGACCCCGCC ACCGGCACCG TCACACTGCC CGAGTCGTTC
CGCAAGTCCT TCGCGGCGGC GCAGGAGGGC GAGTGGTGGC GGCTCTACCT CCCGCCGCAC
CTGGGCGGCA TGGGTGCCCC GCCGACCATC GCCTGGGCGG CGTCCGAGCT GCTCCTCGGG
GCGAACCCGG CGGTGTTCAT GTACATGGCC GGGCCGACGT TCGCCGCGAT CCTCGAGGGC
ATCGGCACGC CATGGCAGAA GAAGATCGCG AACTGGGCCA TCGAGCGGCA CTGGGGCGCG
ACCATGGTGC TGACCGAGCC GGACGCCGGC TCCGACGTCG GCGCAGGCCG GGCGCGGGCC
GTCGAGCAGC CGGACGGCAC CTGGCACATC GAAGGTGTGA AGCGCTTCAT CACCAGCGGT
GACTGGGACA TCCCGGAGAA CATCTTCCAC CTGGTGCTCG CCCGCCCCGA GGGGCACGGC
CCCGGCACCA AGGGCCTGTC GATGTTCGTC GTGCCCAAGT ACCTGCCCGA CCCGGAGACC
GGCGCCCCGG GCGCCCGCAA CGGTGCCTAC GTCACGAACC TTGAGAAGAA AATGGGCCTG
AAGGTCTCGA CCACCTGCGA GCTGCGCTTC GGCGAGCGTG AGCCGGCCGT CGGATGGCTC
GTCGGCGACG TCCACGACGG CATCGCGCAG ATGTTCCGGG TCATCGAGTA CGCCCGGATG
ATGGTCGGCA CGAAGGCGAT CGCCACGTTG TCCACCGGGT ACCTCAACGC GCTGGCCTTC
GCCCGCGAGC GGATCCAGGG CGCCGACCTG ACCCGGGCGT CGGACAAGAC CGCGCCGCGG
GTGGCCATCA TCAACCATCC CGACGTGCGC CGGATGCTCA TGCAGCAGAA GGCCTACGCG
GAGGGGATGC GTGCCCTCGT GCTGTACACC GCTACCTTCC AGGACGCCGT CACGCTGGCG
GCGGCCCGCG GCGAGGTGGA CGACAACGCG GTGCGGATGA ACGACCTGCT GCTCCCGATC
GTGAAGGGAG TCGGCTCGGA GCGCTCCTAC GAACTGCTGG CGAGCTCGCT GCAGGTCCTC
GGCGGCTCCG GATACCTGCA GGACTACCCG ATCGAGCAGT ACATCCGCGA CGCGAAGATC
GACACCCTGT ACGAGGGCAC GACGTCCATC CAGGGCCAGG ACCTCTTCTT CCGGAAGATC
GTCCGGGACA AGGGTCGGGC GCTGACCACT CTGTTCACGC AGGTCCAGGA GTTTGTGAAG
GGCGAGGCGG GCAACGGCGC GCTCCGCGCG GAGCGGGAGT CGCTGGGCGC GGCGCTCGAC
GAGTGCCAGG CCATGGTCGG TTCGATGGTC GGGTTCCTCA CCGCCACCGC CCAGGACAAG
TCCCAGGTCT ACCGGGTCGG GCTGAACACC ACGCGGCTGC TGATGAGCAT CGGCGACCTC
GTCGTCGGCT GGCTGCTGCT GCGCGGTGCC GACGCGGCGC TACGCGGGCT GGACGGCTCC
CCGTCCGAGC GCGACCGGGC GTTCTACGAG GGCAAGATCG CGGCCGCGCG CTGGTTCGCG
GCCAACATCC TGCCGGAGCT GCGCACACGC CGGACGGTGC TGGAGGGCAC CGGTCTCGGG
CTGATGGAGA TGTCCGAAGC GGCGTTCTGA
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| Protein sequence | MGHYRSNLRD IEFNLFEVFG VDRTLGTGPF AEMDRDTAHE VLAELERVAV GPIAESFEDA
DRHPPTLDPA TGTVTLPESF RKSFAAAQEG EWWRLYLPPH LGGMGAPPTI AWAASELLLG
ANPAVFMYMA GPTFAAILEG IGTPWQKKIA NWAIERHWGA TMVLTEPDAG SDVGAGRARA
VEQPDGTWHI EGVKRFITSG DWDIPENIFH LVLARPEGHG PGTKGLSMFV VPKYLPDPET
GAPGARNGAY VTNLEKKMGL KVSTTCELRF GEREPAVGWL VGDVHDGIAQ MFRVIEYARM
MVGTKAIATL STGYLNALAF ARERIQGADL TRASDKTAPR VAIINHPDVR RMLMQQKAYA
EGMRALVLYT ATFQDAVTLA AARGEVDDNA VRMNDLLLPI VKGVGSERSY ELLASSLQVL
GGSGYLQDYP IEQYIRDAKI DTLYEGTTSI QGQDLFFRKI VRDKGRALTT LFTQVQEFVK
GEAGNGALRA ERESLGAALD ECQAMVGSMV GFLTATAQDK SQVYRVGLNT TRLLMSIGDL
VVGWLLLRGA DAALRGLDGS PSERDRAFYE GKIAAARWFA ANILPELRTR RTVLEGTGLG
LMEMSEAAF
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