| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_2662 |
|---|
| Symbol | |
|---|
| ID | 4615948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 2794692 |
|---|
| End bp | 2796527 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639792328 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_938647 |
|---|
| Protein GI | 119868695 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.139362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACACT TCCGCCCCAA CGTCCGAGAT ATCGAGTTCA ACCTTTTCGA GGTCCTCGGT
GTTGACCGAC TGCTCGACGA CGGCTGTTAC GGCGATCTCG ACACCGAGAC GGTGCGCCAC
ATCTTCGAAG AGGTTGTCCG CCTTGCCGAA GGCCCACTGG CCGAATCCTA CGTGCAGGCC
GACCGACACC CGATCCGGTT CGACGCCGCC TCCCACGAGG TCGTCGTCAC CGATCCGCTG
CGCAAATCGG TTCTCGCACT CAAAGAGGCA GGCTGGTGGC GGCTGGGTAT TCCCGAGGAC
ATCGGGGGCA CGCTCGCGCC GATGCCGATG GTGTGGGCGG TCCGGGAGAT CCTGCACTCA
GCCAACCTGT CCGCGGCCTT CTTCAACCTC GGGCCGGAGA TGGCGGCCGC CCTGTGGGAG
GTCGGCACGC CCGAACAACG GCGTTGGGCC GCCGTCGCCA TGGAGCGGGG TTGGGCGGGA
ACCATGGTGC TCACGGAACC GGACGCCGGC TCCGACGTCG GCGCCGGGGT CACCAAAGCA
GTCGAACAGT CGGACGGGAC CTGGCACATC ACCGGCGTCA AACGCTTCAT CTCCGGCGGC
GACGTAGGTG ACACCGCGGA GAACATCTTC CACCTCGTCC TGGCCCGGCC CCAAGGAGCC
GGCCCAGGGA CCAAGGGACT GAGCATGTTC TTCGTCCCGA AGCATCTGTT CGACCCCGCG
ACGATGCAGA TCACCTCCCG CAACGGTGTT TACGTCACCG GGGTCGAGCA CAAAATGGGC
ATCAAGTCTT CCCCAACCTG CGAGATCACC TTCGGCAGAG ACCAACCCGC GATCGGCTGG
TTGGTGGGCG ATGTCCACAA CGGTATCGCC CAGATGTTCA AGGTGATGGA GAACGCACGG
ATGGGCACCG GCGTGATGTC GACGGGGATG CTGTCGACCG GCTACCTCAG CGCACTCGAC
TACGCCAAGA CGCGCATTCA GGGACCTGAT CTGACCCGCA CCTCCGACAA GACCGCGCCC
CGGGTACCGA TCATCCGCCA TCCGGAAGTA CGGCGCTCGC TGTTAACGCA GAAGTCCTAT
GCCGAAGGGC TGCGGGCGCT GTACCTGTTC ACCGCCGTCC ACCAGGACGC CGTTCCTCAG
CTGGCCCGCA GCGTGTCGCA CGCCGAACCG GAGCTCGCCG CCAAGATCAA CGACCTGCTG
CTACCCGTCG TCAAAGCGGT CAGTTCAGAA CGGGCTTACG ACACACTCAA ACTCAGCCTG
CAGATGTTCG GCGGATCTGG TTACCTCCAG GACTATCCGA TGGAGCAGTA TGTCAGGGAC
TGCCTGATCA ACACCCTGTA CGAGGGGACC ACCGCCATTC AGGCACAGGA CTTGTTGTTT
CGCAAAATCA TCCGGGACGA CGGGCAGACC CTCGACCATG TACTGGGGCT CATCGTCAAG
TTCACCGAAT CCGCGGGCGG CTCAACGTTC CAGCAGGAGC GAGCGCTGCT GGCGACTGCG
ATAGAGGACA TCCGATCGAT GGTCCACACG CTGCGCGGGC ACTTCGACGC GGCGCGTGAG
GAGCCCACCG AGGTGTACAG AACGGGTTTG GGATCGGTGC CCTTGCTCTT CGCGCTCGGC
GATCTCGTGA TCGGCTGGCT GCTGCTATGG CAGGCGAAGG TGGCCAACGA CGCGCTGTTG
CAAGCGCACT CAGACCAGGG CCGACAGTTC TACAACGGCA AGATCACCTC GGCACGGTTC
TTCGCTCGCA CAGCACTGCC CGGCATATCG GCGATCCGCG CTGCGGTCGA GGCGGAGGAC
TACGGCGTGA TGGAGTTGGC CGAAGAAGCC TTCTGA
|
|---|
| Protein sequence | MTHFRPNVRD IEFNLFEVLG VDRLLDDGCY GDLDTETVRH IFEEVVRLAE GPLAESYVQA
DRHPIRFDAA SHEVVVTDPL RKSVLALKEA GWWRLGIPED IGGTLAPMPM VWAVREILHS
ANLSAAFFNL GPEMAAALWE VGTPEQRRWA AVAMERGWAG TMVLTEPDAG SDVGAGVTKA
VEQSDGTWHI TGVKRFISGG DVGDTAENIF HLVLARPQGA GPGTKGLSMF FVPKHLFDPA
TMQITSRNGV YVTGVEHKMG IKSSPTCEIT FGRDQPAIGW LVGDVHNGIA QMFKVMENAR
MGTGVMSTGM LSTGYLSALD YAKTRIQGPD LTRTSDKTAP RVPIIRHPEV RRSLLTQKSY
AEGLRALYLF TAVHQDAVPQ LARSVSHAEP ELAAKINDLL LPVVKAVSSE RAYDTLKLSL
QMFGGSGYLQ DYPMEQYVRD CLINTLYEGT TAIQAQDLLF RKIIRDDGQT LDHVLGLIVK
FTESAGGSTF QQERALLATA IEDIRSMVHT LRGHFDAARE EPTEVYRTGL GSVPLLFALG
DLVIGWLLLW QAKVANDALL QAHSDQGRQF YNGKITSARF FARTALPGIS AIRAAVEAED
YGVMELAEEA F
|
|---|
| |