| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3018 |
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| Symbol | |
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| ID | 5671400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3552596 |
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| End bp | 3554455 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641241920 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001507340 |
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| Protein GI | 158314832 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.238191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAGGC TGCCAGGGGA GGAGTCGTTC ATGGGGCACT ACCGGAGCAA TCTCCGCGAC
ATCGAGTTCA ACCTGTTCGA GGTGTTCGGC GTGGACCGGA CGCTCGGGAC CGGGCCCTTC
GCGGAGATGG ACCGCGACAC AGCGCATGAG GTGCTCGCCG AGCTGGAGCG GGTCGCCGTC
GGGCCGATCG CCGAGTCCTT CGAGGACGCC GACCGGCACC CGCCGACACT CGACCCCGCC
ACCGGCACCG TCACACTGCC CGAGTCGTTC CGCAAGTCCT TCGCGGCGGC GCAGGAGGGC
GAGTGGTGGC GGCTCTACCT CCCGCCGCAC CTGGGCGGCA TGGGTGCCCC GCCGACCATC
GCCTGGGCGG CGTCCGAGCT GCTCCTCGGG GCGAACCCGG CGGTGTTCAT GTACATGGCC
GGGCCGACGT TCGCCGCGAT CCTCGAGGGC ATCGGCACGC CATGGCAGAA GAAGATCGCG
AACTGGGCCA TCGAGCGGCA CTGGGGCGCG ACCATGGTGC TGACCGAGCC GGACGCCGGC
TCCGACGTCG GCGCAGGCCG GGCGCGGGCC GTCGAGCAGC CGGACGGCAC CTGGCACATC
GAAGGTGTGA AGCGCTTCAT CACCAGCGGT GACTGGGACA TCCCGGAGAA CATCTTCCAC
CTGGTGCTCG CCCGCCCCGA GGGGCACGGC CCCGGCACCA AGGGCCTGTC GATGTTCGTC
GTGCCCAAGT ACCTGCCCGA CCCGGAGACC GGCGCCCCGG GCGCCCGCAA CGGTGCCTAC
GTCACGAACC TTGAGAAGAA AATGGGCCTG AAGGTCTCGA CCACCTGCGA GCTGCGCTTC
GGCGAGCGTG AGCCGGCCGT CGGATGGCTC GTCGGCGACG TCCACGACGG CATCGCGCAG
ATGTTCCGGG TCATCGAGTA CGCCCGGATG ATGGTCGGCA CGAAGGCGAT CGCCACGTTG
TCCACCGGGT ACCTCAACGC GCTGGCCTTC GCCCGCGAGC GGATCCAGGG CGCCGACCTG
ACCCGGGCGT CGGACAAGAC CGCGCCGCGG GTGGCCATCA TCAACCATCC CGACGTGCGC
CGGATGCTCA TGCAGCAGAA GGCCTACGCG GAGGGGATGC GTGCCCTCGT GCTGTACACC
GCTACCTTCC AGGACGCCGT CACGCTGGCG GCGGCCCGCG GCGAGGTGGA CGACAACGCG
GTGCGGATGA ACGACCTGCT GCTCCCGATC GTGAAGGGAG TCGGCTCGGA GCGCTCCTAC
GAACTGCTGG CGAGCTCGCT GCAGGTCCTC GGCGGCTCCG GATACCTGCA GGACTACCCG
ATCGAGCAGT ACATCCGCGA CGCGAAGATC GACACCCTGT ACGAGGGCAC GACGTCCATC
CAGGGCCAGG ACCTCTTCTT CCGGAAGATC GTCCGGGACA AGGGTCGGGC GCTGACCACT
CTGTTCACGC AGGTCCAGGA GTTTGTGAAG GGCGAGGCGG GCAACGGCGC GCTCCGCGCG
GAGCGGGAGT CGCTGGGCGC GGCGCTCGAC GAGTGCCAGG CCATGGTCGG TTCGATGGTC
GGGTTCCTCA CCGCCACCGC CCAGGACAAG TCCCAGGTCT ACCGGGTCGG GCTGAACACC
ACGCGGCTGC TGATGAGCAT CGGCGACCTC GTCGTCGGCT GGCTGCTGCT GCGCGGTGCC
GACGCGGCGC TACGCGGGCT GGACGGCTCC CCGTCCGAGC GCGACCGGGC GTTCTACGAG
GGCAAGATCG CGGCCGCGCG CTGGTTCGCG GCCAACATCC TGCCGGAGCT GCGCACACGC
CGGACGGTGC TGGAGGGCAC CGGTCTCGGG CTGATGGAGA TGTCCGAAGC GGCGTTCTGA
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| Protein sequence | MPRLPGEESF MGHYRSNLRD IEFNLFEVFG VDRTLGTGPF AEMDRDTAHE VLAELERVAV
GPIAESFEDA DRHPPTLDPA TGTVTLPESF RKSFAAAQEG EWWRLYLPPH LGGMGAPPTI
AWAASELLLG ANPAVFMYMA GPTFAAILEG IGTPWQKKIA NWAIERHWGA TMVLTEPDAG
SDVGAGRARA VEQPDGTWHI EGVKRFITSG DWDIPENIFH LVLARPEGHG PGTKGLSMFV
VPKYLPDPET GAPGARNGAY VTNLEKKMGL KVSTTCELRF GEREPAVGWL VGDVHDGIAQ
MFRVIEYARM MVGTKAIATL STGYLNALAF ARERIQGADL TRASDKTAPR VAIINHPDVR
RMLMQQKAYA EGMRALVLYT ATFQDAVTLA AARGEVDDNA VRMNDLLLPI VKGVGSERSY
ELLASSLQVL GGSGYLQDYP IEQYIRDAKI DTLYEGTTSI QGQDLFFRKI VRDKGRALTT
LFTQVQEFVK GEAGNGALRA ERESLGAALD ECQAMVGSMV GFLTATAQDK SQVYRVGLNT
TRLLMSIGDL VVGWLLLRGA DAALRGLDGS PSERDRAFYE GKIAAARWFA ANILPELRTR
RTVLEGTGLG LMEMSEAAF
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