More than 300 homologs were found in PanDaTox collection
for query gene Gbro_4420 on replicon NC_013441
Organism: Gordonia bronchialis DSM 43247



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009953  Sare_0086  acyl-CoA dehydrogenase domain-containing protein  60.52 
 
 
617 aa  760    Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0567626 
 
 
-
 
NC_008705  Mkms_2662  acyl-CoA dehydrogenase domain-containing protein  55.7 
 
 
611 aa  690    Mycobacterium sp. KMS  Bacteria  normal  0.139362  normal 
 
 
-
 
NC_013441  Gbro_4420  acyl-CoA dehydrogenase domain protein  100 
 
 
611 aa  1259    Gordonia bronchialis DSM 43247  Bacteria  normal  0.921318  n/a   
 
 
-
 
NC_013159  Svir_38750  acyl-CoA dehydrogenase  70.08 
 
 
614 aa  882    Saccharomonospora viridis DSM 43017  Bacteria  normal  0.802749  normal 
 
 
-
 
NC_013757  Gobs_4833  acyl-CoA dehydrogenase domain protein  64.72 
 
 
614 aa  796    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2647  acyl-CoA dehydrogenase domain-containing protein  55.54 
 
 
611 aa  685    Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0089  acyl-CoA dehydrogenase domain-containing protein  60.68 
 
 
617 aa  763    Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0210  putative acyl-CoA dehydrogenase  65.03 
 
 
607 aa  794    Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0430  acyl-CoA dehydrogenase domain-containing protein  68.14 
 
 
611 aa  843    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.377352 
 
 
-
 
NC_013595  Sros_8960  acyl-CoA dehydrogenase  61.87 
 
 
607 aa  772    Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0232  acyl-CoA dehydrogenase domain-containing protein  77.12 
 
 
611 aa  978    Mycobacterium sp. JLS  Bacteria  normal  normal  0.235095 
 
 
-
 
NC_013235  Namu_5295  acyl-CoA dehydrogenase domain protein  63.67 
 
 
621 aa  790    Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0053  acyl-CoA dehydrogenase-like  61.69 
 
 
614 aa  777    Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3327  acyl-CoA dehydrogenase domain-containing protein  64.38 
 
 
610 aa  815    Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.429773 
 
 
-
 
NC_009921  Franean1_7271  acyl-CoA dehydrogenase domain-containing protein  61.05 
 
 
609 aa  762    Frankia sp. EAN1pec  Bacteria  normal  normal  0.319436 
 
 
-
 
NC_009565  TBFG_10247  acyl-CoA dehydrogenase fadE5  77.12 
 
 
611 aa  969    Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0434  acyl-CoA dehydrogenase domain protein  73.69 
 
 
610 aa  924    Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5441  acyl-CoA dehydrogenase domain protein  63.83 
 
 
605 aa  791    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11495  acyl-CoA dehydrogenase fadE15  65.03 
 
 
609 aa  808    Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.00000000000443492  normal  0.167351 
 
 
-
 
NC_008705  Mkms_1531  acyl-CoA dehydrogenase domain-containing protein  57.14 
 
 
615 aa  721    Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6963  acyl-CoA dehydrogenase domain protein  69.48 
 
 
612 aa  883    Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_26500  acyl-CoA dehydrogenase  63.33 
 
 
617 aa  786    Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.348729 
 
 
-
 
NC_013131  Caci_8827  acyl-CoA dehydrogenase domain protein  61.05 
 
 
609 aa  783    Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_0252  acyl-CoA dehydrogenase domain-containing protein  77.12 
 
 
611 aa  978    Mycobacterium sp. KMS  Bacteria  normal  normal  0.104888 
 
 
-
 
NC_008146  Mmcs_0242  acyl-CoA dehydrogenase-like protein  77.12 
 
 
611 aa  978    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_1508  acyl-CoA dehydrogenase-like protein  57.14 
 
 
615 aa  721    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_2618  acyl-CoA dehydrogenase-like protein  55.7 
 
 
611 aa  690    Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0271  acyl-CoA dehydrogenase domain protein  65.14 
 
 
610 aa  832    Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3018  acyl-CoA dehydrogenase domain-containing protein  61.05 
 
 
619 aa  763    Frankia sp. EAN1pec  Bacteria  normal  0.238191  normal 
 
 
-
 
NC_013947  Snas_5917  acyl-CoA dehydrogenase domain-containing protein  61.33 
 
 
616 aa  730    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0265  acyl-CoA dehydrogenase domain-containing protein  77.29 
 
 
611 aa  989    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.746207  normal  0.13974 
 
 
-
 
NC_008699  Noca_4429  acyl-CoA dehydrogenase domain-containing protein  62.06 
 
 
621 aa  795    Nocardioides sp. JS614  Bacteria  decreased coverage  0.00413349  n/a   
 
 
-
 
NC_008726  Mvan_0238  acyl-CoA dehydrogenase domain-containing protein  69.61 
 
 
611 aa  859    Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.138949 
 
 
-
 
NC_009338  Mflv_0409  acyl-CoA dehydrogenase domain-containing protein  74.84 
 
 
611 aa  961    Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.0268074 
 
 
-
 
NC_009077  Mjls_1508  acyl-CoA dehydrogenase domain-containing protein  58.06 
 
 
633 aa  631  1e-179  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5060  acyl-CoA dehydrogenase domain protein  37.98 
 
 
609 aa  363  6e-99  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1305  acyl-CoA dehydrogenase domain-containing protein  35.87 
 
 
604 aa  357  3.9999999999999996e-97  Desulfococcus oleovorans Hxd3  Bacteria  decreased coverage  0.000000712718  n/a   
 
 
-
 
NC_007517  Gmet_2270  Acyl-CoA dehydrogenase-like  37.07 
 
 
615 aa  353  2.9999999999999997e-96  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.000000247308  hitchhiker  0.000246655 
 
 
-
 
NC_010681  Bphyt_0661  acyl-CoA dehydrogenase domain protein  37.36 
 
 
595 aa  354  2.9999999999999997e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2366  acyl-CoA dehydrogenase domain-containing protein  35.7 
 
 
601 aa  353  5.9999999999999994e-96  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000727045  n/a   
 
 
-
 
NC_007951  Bxe_A4038  putative acyl-CoA dehydrogenase oxidoreductase  37.42 
 
 
595 aa  352  8.999999999999999e-96  Burkholderia xenovorans LB400  Bacteria  normal  0.922091  normal  0.0585748 
 
 
-
 
NC_010622  Bphy_0385  acyl-CoA dehydrogenase domain-containing protein  37.04 
 
 
595 aa  343  4e-93  Burkholderia phymatum STM815  Bacteria  normal  0.840786  normal  0.461604 
 
 
-
 
NC_006348  BMA0197  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
595 aa  343  5.999999999999999e-93  Burkholderia mallei ATCC 23344  Bacteria  normal  0.908056  n/a   
 
 
-
 
NC_009080  BMA10247_2410  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
595 aa  343  5.999999999999999e-93  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2330  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
595 aa  343  5.999999999999999e-93  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2748  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
595 aa  343  5.999999999999999e-93  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010084  Bmul_0578  acyl-CoA dehydrogenase domain-containing protein  36.41 
 
 
595 aa  342  1e-92  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2164  acyl-CoA dehydrogenase domain-containing protein  36.05 
 
 
605 aa  341  2e-92  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000000583422  n/a   
 
 
-
 
NC_007651  BTH_I0564  acyl-CoA dehydrogenase domain-containing protein  36.83 
 
 
595 aa  341  2.9999999999999998e-92  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_2748  acyl-CoA dehydrogenase domain-containing protein  35.76 
 
 
595 aa  340  5.9999999999999996e-92  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.139086  normal 
 
 
-
 
NC_008060  Bcen_2109  acyl-CoA dehydrogenase-like  35.76 
 
 
595 aa  340  5.9999999999999996e-92  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2721  acyl-CoA dehydrogenase domain-containing protein  35.76 
 
 
595 aa  340  5.9999999999999996e-92  Burkholderia cenocepacia HI2424  Bacteria  normal  0.440911  n/a   
 
 
-
 
NC_009076  BURPS1106A_0695  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  339  8e-92  Burkholderia pseudomallei 1106a  Bacteria  normal  0.832914  n/a   
 
 
-
 
NC_007434  BURPS1710b_0857  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  339  8e-92  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0680  acyl-CoA dehydrogenase domain-containing protein  36.67 
 
 
595 aa  339  8e-92  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1177  acyl-CoA dehydrogenase family protein  34.09 
 
 
598 aa  337  2.9999999999999997e-91  Colwellia psychrerythraea 34H  Bacteria  normal  0.158836  n/a   
 
 
-
 
NC_007510  Bcep18194_A6048  Acyl-CoA dehydrogenase-like  35.92 
 
 
599 aa  337  3.9999999999999995e-91  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2639  acyl-CoA dehydrogenase domain-containing protein  35.76 
 
 
595 aa  337  3.9999999999999995e-91  Burkholderia ambifaria MC40-6  Bacteria  normal  0.0601004  normal  0.257028 
 
 
-
 
NC_010581  Bind_1754  acyl-CoA dehydrogenase domain-containing protein  34.52 
 
 
594 aa  334  2e-90  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.0420795 
 
 
-
 
NC_009439  Pmen_3101  acyl-CoA dehydrogenase domain-containing protein  35.01 
 
 
592 aa  333  7.000000000000001e-90  Pseudomonas mendocina ymp  Bacteria  normal  0.165418  normal 
 
 
-
 
NC_008740  Maqu_0515  acyl-CoA dehydrogenase domain-containing protein  34.3 
 
 
591 aa  332  9e-90  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0007  acyl-CoA dehydrogenase domain-containing protein  34.62 
 
 
596 aa  331  2e-89  Acidiphilium cryptum JF-5  Bacteria  normal  0.419421  n/a   
 
 
-
 
NC_009668  Oant_4033  acyl-CoA dehydrogenase domain-containing protein  33.98 
 
 
597 aa  330  7e-89  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.795877  n/a   
 
 
-
 
NC_008825  Mpe_A0419  putative acyl-CoA dehydrogenase oxidoreductase protein  35.6 
 
 
596 aa  329  8e-89  Methylibium petroleiphilum PM1  Bacteria  normal  0.232992  normal 
 
 
-
 
NC_007969  Pcryo_0148  acyl-CoA dehydrogenase-like  36.15 
 
 
606 aa  329  9e-89  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_5167  Acyl-CoA dehydrogenase-like  35.17 
 
 
598 aa  328  1.0000000000000001e-88  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.0783661 
 
 
-
 
NC_011666  Msil_1741  acyl-CoA dehydrogenase domain protein  34.03 
 
 
594 aa  327  3e-88  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_012856  Rpic12D_0363  acyl-CoA dehydrogenase domain protein  35.75 
 
 
595 aa  326  7e-88  Ralstonia pickettii 12D  Bacteria  normal  0.84094  normal 
 
 
-
 
NC_004311  BRA0795  acyl-CoA dehydrogenase family protein  33.33 
 
 
597 aa  325  1e-87  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0746  acyl-CoA dehydrogenase family protein  33.33 
 
 
597 aa  325  1e-87  Brucella ovis ATCC 25840  Bacteria  normal  0.398029  n/a   
 
 
-
 
NC_003295  RSc0473  putative acyl-CoA dehydrogenase oxidoreductase protein  34.74 
 
 
595 aa  325  2e-87  Ralstonia solanacearum GMI1000  Bacteria  normal  0.390432  normal 
 
 
-
 
NC_009636  Smed_0146  acyl-CoA dehydrogenase domain-containing protein  33.5 
 
 
598 aa  324  3e-87  Sinorhizobium medicae WSM419  Bacteria  normal  0.986474  normal  0.238183 
 
 
-
 
NC_008228  Patl_1918  acyl-CoA dehydrogenase-like  35.12 
 
 
600 aa  324  3e-87  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.477774  n/a   
 
 
-
 
NC_007973  Rmet_0385  acyl-CoA dehydrogenase-like protein  35.24 
 
 
595 aa  323  7e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.13259 
 
 
-
 
NC_009524  PsycPRwf_0116  acyl-CoA dehydrogenase domain-containing protein  35.74 
 
 
606 aa  323  8e-87  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3278  acyl-CoA dehydrogenase domain-containing protein  34.63 
 
 
597 aa  322  9.999999999999999e-87  Methylobacterium sp. 4-46  Bacteria  normal  0.556327  normal  0.981132 
 
 
-
 
NC_010524  Lcho_4032  acyl-CoA dehydrogenase domain-containing protein  34.63 
 
 
596 aa  322  9.999999999999999e-87  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000000200788 
 
 
-
 
NC_007204  Psyc_0137  acyl-CoA dehydrogenase  35.81 
 
 
606 aa  322  1.9999999999999998e-86  Psychrobacter arcticus 273-4  Bacteria  normal  normal  0.112262 
 
 
-
 
NC_010682  Rpic_0348  acyl-CoA dehydrogenase domain protein  35.24 
 
 
595 aa  322  1.9999999999999998e-86  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6066  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  35.28 
 
 
598 aa  321  3e-86  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_3569  acyl-CoA dehydrogenase domain protein  35.28 
 
 
596 aa  320  3.9999999999999996e-86  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.452125 
 
 
-
 
NC_010172  Mext_3245  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
596 aa  320  5e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.532993  normal  0.0328142 
 
 
-
 
NC_008781  Pnap_1225  acyl-CoA dehydrogenase domain-containing protein  36.89 
 
 
596 aa  320  7e-86  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.311938  normal  0.201393 
 
 
-
 
NC_008345  Sfri_2039  acyl-CoA dehydrogenase domain-containing protein  33.23 
 
 
598 aa  320  7e-86  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3957  acyl-CoA dehydrogenase-like  33.01 
 
 
598 aa  319  1e-85  Polaromonas sp. JS666  Bacteria  normal  0.574903  normal 
 
 
-
 
NC_008044  TM1040_1557  acyl-CoA dehydrogenase-like  33.33 
 
 
593 aa  319  1e-85  Ruegeria sp. TM1040  Bacteria  normal  normal  0.538695 
 
 
-
 
NC_009654  Mmwyl1_1571  acyl-CoA dehydrogenase domain-containing protein  35.58 
 
 
601 aa  318  1e-85  Marinomonas sp. MWYL1  Bacteria  normal  hitchhiker  0.0000982993 
 
 
-
 
NC_011989  Avi_0599  acyl-CoA dehydrogenase  33.01 
 
 
597 aa  318  2e-85  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0446  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  34.74 
 
 
595 aa  318  2e-85  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_2538  acyl-CoA dehydrogenase domain-containing protein  36.7 
 
 
596 aa  318  2e-85  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000216055 
 
 
-
 
NC_008782  Ajs_0592  acyl-CoA dehydrogenase domain-containing protein  32.96 
 
 
598 aa  317  3e-85  Acidovorax sp. JS42  Bacteria  normal  normal  0.559108 
 
 
-
 
NC_009439  Pmen_4079  acyl-CoA dehydrogenase domain-containing protein  35.28 
 
 
592 aa  315  9.999999999999999e-85  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1402  acyl-CoA dehydrogenase domain-containing protein  34.14 
 
 
619 aa  315  9.999999999999999e-85  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.55208 
 
 
-
 
NC_011369  Rleg2_0213  acyl-CoA dehydrogenase domain protein  32.85 
 
 
598 aa  315  1.9999999999999998e-84  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_0241  acyl-CoA dehydrogenase domain protein  33.17 
 
 
598 aa  315  1.9999999999999998e-84  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.471224  normal 
 
 
-
 
NC_007778  RPB_4606  Acyl-CoA dehydrogenase-like  33.71 
 
 
596 aa  315  1.9999999999999998e-84  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.504166  normal 
 
 
-
 
NC_010725  Mpop_3441  acyl-CoA dehydrogenase domain protein  37.05 
 
 
596 aa  313  6.999999999999999e-84  Methylobacterium populi BJ001  Bacteria  normal  0.189286  normal 
 
 
-
 
NC_011138  MADE_02316  Acyl-CoA dehydrogenase  33.98 
 
 
599 aa  312  1e-83  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.254784  n/a   
 
 
-
 
NC_008463  PA14_06620  putative acyl-CoA dehydrogenase  34.57 
 
 
598 aa  312  1e-83  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0885  acyl-CoA dehydrogenase domain protein  34.03 
 
 
596 aa  311  2e-83  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.894915  n/a   
 
 
-
 
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