Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmcs_2618 |
Symbol | |
ID | 4111451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium sp. MCS |
Kingdom | Bacteria |
Replicon accession | NC_008146 |
Strand | + |
Start bp | 2776804 |
End bp | 2778639 |
Gene Length | 1836 bp |
Protein Length | 611 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638031743 |
Product | acyl-CoA dehydrogenase-like protein |
Protein accession | YP_639782 |
Protein GI | 108799585 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACACT TCCGCCCCAA CGTCCGAGAT ATCGAGTTCA ACCTTTTCGA GGTCCTCGGT GTTGACCGAC TGCTCGACGA CGGCTGTTAC GGCGATCTCG ACACCGAGAC GGTGCGCCAC ATCTTCGAAG AGGTTGTCCG CCTTGCCGAA GGCCCACTGG CCGAATCCTA CGTGCAGGCC GACCGACACC CGATCCGGTT CGACGCCGCC TCCCACGAGG TCGTCGTCAC CGATCCGCTG CGCAAATCGG TTCTCGCACT CAAAGAGGCA GGCTGGTGGC GGCTGGGTAT TCCCGAGGAC ATCGGGGGCA CGCTCGCGCC GATGCCGATG GTGTGGGCGG TCCGGGAGAT CCTGCACTCA GCCAACCTGT CCGCGGCCTT CTTCAACCTC GGGCCGGAGA TGGCGGCCGC CCTGTGGGAG GTCGGCACGC CCGAACAACG GCGTTGGGCC GCCGTCGCCA TGGAGCGGGG TTGGGCGGGA ACCATGGTGC TCACGGAACC GGACGCCGGC TCCGACGTCG GCGCCGGGGT CACCAAAGCA GTCGAACAGT CGGACGGGAC CTGGCACATC ACCGGCGTCA AACGCTTCAT CTCCGGCGGC GACGTAGGTG ACACCGCGGA GAACATCTTC CACCTCGTCC TGGCCCGGCC CCAAGGAGCC GGCCCAGGGA CCAAGGGACT GAGCATGTTC TTCGTCCCGA AGCATCTGTT CGACCCCGCG ACGATGCAGA TCACCTCCCG CAACGGTGTT TACGTCACCG GGGTCGAGCA CAAAATGGGC ATCAAGTCTT CCCCAACCTG CGAGATCACC TTCGGCAGAG ACCAACCCGC GATCGGCTGG TTGGTGGGCG ATGTCCACAA CGGTATCGCC CAGATGTTCA AGGTGATGGA GAACGCACGG ATGGGCACCG GCGTGATGTC GACGGGGATG CTGTCGACCG GCTACCTCAG CGCACTCGAC TACGCCAAGA CGCGCATTCA GGGACCTGAT CTGACCCGCA CCTCCGACAA GACCGCGCCC CGGGTACCGA TCATCCGCCA TCCGGAAGTA CGGCGCTCGC TGTTAACGCA GAAGTCCTAT GCCGAAGGGC TGCGGGCGCT GTACCTGTTC ACCGCCGTCC ACCAGGACGC CGTTCCTCAG CTGGCCCGCA GCGTGTCGCA CGCCGAACCG GAGCTCGCCG CCAAGATCAA CGACCTGCTG CTACCCGTCG TCAAAGCGGT CAGTTCAGAA CGGGCTTACG ACACACTCAA ACTCAGCCTG CAGATGTTCG GCGGATCTGG TTACCTCCAG GACTATCCGA TGGAGCAGTA TGTCAGGGAC TGCCTGATCA ACACCCTGTA CGAGGGGACC ACCGCCATTC AGGCACAGGA CTTGTTGTTT CGCAAAATCA TCCGGGACGA CGGGCAGACC CTCGACCATG TACTGGGGCT CATCGTCAAG TTCACCGAAT CCGCGGGCGG CTCAACGTTC CAGCAGGAGC GAGCGCTGCT GGCGACTGCG ATAGAGGACA TCCGATCGAT GGTCCACACG CTGCGCGGGC ACTTCGACGC GGCGCGTGAG GAGCCCACCG AGGTGTACAG AACGGGTTTG GGATCGGTGC CCTTGCTCTT CGCGCTCGGC GATCTCGTGA TCGGCTGGCT GCTGCTATGG CAGGCGAAGG TGGCCAACGA CGCGCTGTTG CAAGCGCACT CAGACCAGGG CCGACAGTTC TACAACGGCA AGATCACCTC GGCACGGTTC TTCGCTCGCA CAGCACTGCC CGGCATATCG GCGATCCGCG CTGCGGTCGA GGCGGAGGAC TACGGCGTGA TGGAGTTGGC CGAAGAAGCC TTCTGA
|
Protein sequence | MTHFRPNVRD IEFNLFEVLG VDRLLDDGCY GDLDTETVRH IFEEVVRLAE GPLAESYVQA DRHPIRFDAA SHEVVVTDPL RKSVLALKEA GWWRLGIPED IGGTLAPMPM VWAVREILHS ANLSAAFFNL GPEMAAALWE VGTPEQRRWA AVAMERGWAG TMVLTEPDAG SDVGAGVTKA VEQSDGTWHI TGVKRFISGG DVGDTAENIF HLVLARPQGA GPGTKGLSMF FVPKHLFDPA TMQITSRNGV YVTGVEHKMG IKSSPTCEIT FGRDQPAIGW LVGDVHNGIA QMFKVMENAR MGTGVMSTGM LSTGYLSALD YAKTRIQGPD LTRTSDKTAP RVPIIRHPEV RRSLLTQKSY AEGLRALYLF TAVHQDAVPQ LARSVSHAEP ELAAKINDLL LPVVKAVSSE RAYDTLKLSL QMFGGSGYLQ DYPMEQYVRD CLINTLYEGT TAIQAQDLLF RKIIRDDGQT LDHVLGLIVK FTESAGGSTF QQERALLATA IEDIRSMVHT LRGHFDAARE EPTEVYRTGL GSVPLLFALG DLVIGWLLLW QAKVANDALL QAHSDQGRQF YNGKITSARF FARTALPGIS AIRAAVEAED YGVMELAEEA F
|
| |