More than 300 homologs were found in PanDaTox collection
for query gene Dbac_2829 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013173  Dbac_2829  response regulator receiver protein  100 
 
 
134 aa  269  9e-72  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1780  response regulator receiver protein  48.67 
 
 
130 aa  101  3e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.233106 
 
 
-
 
NC_007519  Dde_1521  response regulator receiver domain-containing protein  44.25 
 
 
126 aa  99  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_0063  response regulator receiver protein  45.16 
 
 
130 aa  96.3  1e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008687  Pden_2964  two component, sigma54 specific, Fis family transcriptional regulator  37.74 
 
 
441 aa  67  0.00000000008  Paracoccus denitrificans PD1222  Bacteria  normal  0.0210387  normal  0.108805 
 
 
-
 
NC_013173  Dbac_0715  response regulator receiver protein  35.65 
 
 
124 aa  66.2  0.0000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_3236  multi-sensor hybrid histidine kinase  41.94 
 
 
725 aa  66.2  0.0000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.142395 
 
 
-
 
NC_011145  AnaeK_1886  two component, sigma54 specific, transcriptional regulator, Fis family  35.78 
 
 
461 aa  63.5  0.0000000009  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007493  RSP_2130  two component, sigma54 specific, Fis family transcriptional regulator  36.54 
 
 
442 aa  63.2  0.000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.558101  n/a   
 
 
-
 
NC_007760  Adeh_1992  two component, sigma54 specific, Fis family transcriptional regulator  35.78 
 
 
460 aa  63.5  0.000000001  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_1081  two component  34.62 
 
 
441 aa  63.2  0.000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.136641  normal  0.653656 
 
 
-
 
NC_008741  Dvul_3023  response regulator receiver protein  38.53 
 
 
130 aa  62  0.000000002  Desulfovibrio vulgaris DP4  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2541  two component, sigma54 specific, Fis family transcriptional regulator  35.58 
 
 
438 aa  62.4  0.000000002  Jannaschia sp. CCS1  Bacteria  normal  0.281957  normal  0.250281 
 
 
-
 
NC_008554  Sfum_0828  multi-sensor signal transduction histidine kinase  30.17 
 
 
567 aa  62.4  0.000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2368  putative PAS/PAC sensor protein  37.65 
 
 
270 aa  61.6  0.000000003  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007298  Daro_0972  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  40.96 
 
 
994 aa  61.2  0.000000004  Dechloromonas aromatica RCB  Bacteria  normal  0.172335  normal 
 
 
-
 
NC_008228  Patl_1538  response regulator receiver modulated diguanylate phosphodiesterase  36.05 
 
 
563 aa  61.2  0.000000004  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0715  two component, sigma54 specific, Fis family transcriptional regulator  35.58 
 
 
442 aa  61.2  0.000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0889351  normal  0.39603 
 
 
-
 
NC_008609  Ppro_2721  response regulator receiver protein  39.51 
 
 
188 aa  61.2  0.000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0862  response regulator receiver protein  40.7 
 
 
293 aa  60.8  0.000000006  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.747276  normal  0.358 
 
 
-
 
NC_009049  Rsph17029_0805  two component, sigma54 specific, Fis family transcriptional regulator  35.58 
 
 
442 aa  60.8  0.000000007  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  32.74 
 
 
410 aa  60.1  0.000000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_0769  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
453 aa  60.1  0.000000009  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.165448  n/a   
 
 
-
 
NC_010814  Glov_1569  response regulator receiver modulated metal dependent phosphohydrolase  44.19 
 
 
452 aa  59.7  0.00000001  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2604  two component, sigma54 specific, Fis family transcriptional regulator  36.47 
 
 
459 aa  59.7  0.00000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_1105  two component, sigma54 specific, Fis family transcriptional regulator  40.91 
 
 
475 aa  58.9  0.00000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.926771  normal  0.835973 
 
 
-
 
NC_004578  PSPTO_2117  response regulator  29.91 
 
 
394 aa  59.7  0.00000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0129975  n/a   
 
 
-
 
NC_007005  Psyr_1912  response regulator receiver:stage II sporulation E  29.91 
 
 
394 aa  59.3  0.00000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.432168  hitchhiker  0.00180426 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  31.62 
 
 
513 aa  58.9  0.00000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  43.59 
 
 
455 aa  58.9  0.00000002  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  36.84 
 
 
451 aa  59.3  0.00000002  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_008044  TM1040_1461  two component, sigma54 specific, Fis family transcriptional regulator  32.69 
 
 
445 aa  59.3  0.00000002  Ruegeria sp. TM1040  Bacteria  normal  0.0783973  normal  0.675596 
 
 
-
 
NC_011060  Ppha_1800  two component, sigma54 specific, transcriptional regulator, Fis family  28.04 
 
 
464 aa  58.9  0.00000003  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.458412  n/a   
 
 
-
 
NC_007492  Pfl01_3849  response regulator receiver (CheY) modulated Serine phosphatase  27.35 
 
 
412 aa  58.5  0.00000003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.658628 
 
 
-
 
NC_008687  Pden_4405  two component, sigma54 specific, Fis family transcriptional regulator  35.56 
 
 
448 aa  58.5  0.00000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.851623  normal  0.211367 
 
 
-
 
NC_011769  DvMF_2549  response regulator receiver sensor signal transduction histidine kinase  38 
 
 
446 aa  58.2  0.00000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_0496  two component AraC family transcriptional regulator  31.03 
 
 
543 aa  57.8  0.00000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2057  two component, sigma54 specific, Fis family transcriptional regulator  34.21 
 
 
448 aa  57.8  0.00000005  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1929  response regulator receiver protein  30.77 
 
 
394 aa  57.8  0.00000006  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.310245 
 
 
-
 
NC_012918  GM21_4024  two component, sigma54 specific, transcriptional regulator, Fis family  30.53 
 
 
467 aa  57.4  0.00000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  6.42797e-16 
 
 
-
 
NC_009512  Pput_3577  response regulator receiver protein  29.06 
 
 
393 aa  57.4  0.00000006  Pseudomonas putida F1  Bacteria  decreased coverage  0.00266085  normal 
 
 
-
 
NC_009972  Haur_2366  two component, sigma54 specific, Fis family transcriptional regulator  36.19 
 
 
385 aa  57.4  0.00000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000342445  n/a   
 
 
-
 
NC_011146  Gbem_3940  two component, sigma54 specific, transcriptional regulator, Fis family  30.53 
 
 
467 aa  57.4  0.00000006  Geobacter bemidjiensis Bem  Bacteria  decreased coverage  0.0000637809  n/a   
 
 
-
 
NC_007492  Pfl01_5184  response regulator receiver domain-containing protein  34.91 
 
 
148 aa  57.4  0.00000007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.0546005  normal  0.118263 
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  33.65 
 
 
121 aa  57  0.00000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_3444  response regulator receiver protein  29.79 
 
 
120 aa  57  0.00000009  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009483  Gura_4418  two component, sigma-54 specific, Fis family transcriptional regulator  28.42 
 
 
466 aa  57  0.00000009  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002947  PP_2165  response regulator  29.06 
 
 
393 aa  56.6  0.0000001  Pseudomonas putida KT2440  Bacteria  normal  0.0249002  normal  0.813701 
 
 
-
 
NC_007519  Dde_0532  response regulator receiver /GGDEF/PAS/PAC domain-containing protein  27.34 
 
 
715 aa  56.6  0.0000001  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1706  response regulator receiver modulated serine phosphatase  29.06 
 
 
393 aa  56.6  0.0000001  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  0.000168842 
 
 
-
 
NC_009620  Smed_4689  two component, sigma54 specific, Fis family transcriptional regulator  36.36 
 
 
447 aa  56.6  0.0000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.338732 
 
 
-
 
NC_010814  Glov_1745  response regulator receiver sensor signal transduction histidine kinase  30.17 
 
 
417 aa  56.2  0.0000002  Geobacter lovleyi SZ  Bacteria  normal  0.0330192  n/a   
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  38.37 
 
 
214 aa  55.5  0.0000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.785726 
 
 
-
 
NC_011891  A2cp1_1183  two component, sigma54 specific, transcriptional regulator, Fis family  38.64 
 
 
481 aa  55.8  0.0000002  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_1988  two component, sigma54 specific, transcriptional regulator, Fis family  28.68 
 
 
509 aa  55.8  0.0000002  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_2866  two component transcriptional regulator, winged helix family  41.1 
 
 
231 aa  55.8  0.0000002  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_007760  Adeh_1055  two component, sigma54 specific, Fis family transcriptional regulator  38.64 
 
 
481 aa  56.2  0.0000002  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.874499  n/a   
 
 
-
 
NC_011145  AnaeK_1114  two component, sigma54 specific, transcriptional regulator, Fis family  38.64 
 
 
501 aa  55.8  0.0000002  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0784  two component transcriptional regulator  39.76 
 
 
239 aa  55.8  0.0000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2343  two component transcriptional regulator, Fis family  35.56 
 
 
185 aa  55.1  0.0000003  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.888574  n/a   
 
 
-
 
NC_006348  BMA0261  response regulator  35.37 
 
 
439 aa  55.1  0.0000003  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  35.85 
 
 
127 aa  55.1  0.0000003  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_007760  Adeh_1607  two component Fis family transcriptional regulator  35.56 
 
 
185 aa  55.1  0.0000003  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.016434  n/a   
 
 
-
 
NC_009675  Anae109_0539  multi-sensor hybrid histidine kinase  42.31 
 
 
816 aa  55.1  0.0000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.146269  normal 
 
 
-
 
NC_010501  PputW619_1682  response regulator receiver modulated serine phosphatase  29.06 
 
 
412 aa  55.1  0.0000003  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0762  response regulator receiver modulated metal dependent phosphohydrolase  32.04 
 
 
368 aa  55.1  0.0000003  Thermotoga sp. RQ2  Bacteria  normal  0.218112  n/a   
 
 
-
 
NC_012560  Avin_32720  Response regulator  31.62 
 
 
394 aa  55.1  0.0000003  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1347  response regulator receiver protein  33.33 
 
 
688 aa  55.1  0.0000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2255  two component transcriptional regulator, Fis family  35.56 
 
 
185 aa  55.1  0.0000003  Anaeromyxobacter sp. K  Bacteria  normal  0.0449716  n/a   
 
 
-
 
NC_008836  BMA10229_A2388  response regulator  35.37 
 
 
481 aa  55.1  0.0000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1719  flagellar regulatory protein C  32.22 
 
 
479 aa  54.7  0.0000004  Vibrio cholerae O395  Bacteria  normal  0.0473988  n/a   
 
 
-
 
NC_007434  BURPS1710b_0923  response regulator  35.37 
 
 
481 aa  55.1  0.0000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  29.09 
 
 
124 aa  54.7  0.0000004  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_011898  Ccel_3249  two component transcriptional regulator, AraC family  33.72 
 
 
531 aa  54.7  0.0000004  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_0701  sigma-54 factor interaction domain-containing protein  35.51 
 
 
449 aa  55.1  0.0000004  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_013730  Slin_0751  two component, sigma54 specific, transcriptional regulator, Fis family  30.59 
 
 
490 aa  55.1  0.0000004  Spirosoma linguale DSM 74  Bacteria  normal  0.664159  normal 
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  31.76 
 
 
456 aa  54.7  0.0000004  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  31.76 
 
 
456 aa  54.7  0.0000004  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_008785  BMASAVP1_A2689  response regulator  35.37 
 
 
481 aa  55.1  0.0000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2469  response regulator  35.37 
 
 
481 aa  55.1  0.0000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.129941  n/a   
 
 
-
 
NC_009076  BURPS1106A_0757  response regulator/HD domain-containing protein  35.37 
 
 
481 aa  55.1  0.0000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_1833  putative PAS/PAC sensor protein  41.46 
 
 
560 aa  54.3  0.0000005  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_0290  integral membrane sensor hybrid histidine kinase  36.7 
 
 
758 aa  54.3  0.0000005  Enterobacter sp. 638  Bacteria  normal  normal  0.312795 
 
 
-
 
NC_012793  GWCH70_3334  response regulator receiver protein  28.72 
 
 
120 aa  54.3  0.0000005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3715  multi-sensor signal transduction histidine kinase  34.52 
 
 
653 aa  54.7  0.0000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_3717  response regulator receiver sensor signal transduction histidine kinase  35.14 
 
 
401 aa  54.3  0.0000005  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_1635  multi-sensor hybrid histidine kinase  38.39 
 
 
930 aa  54.3  0.0000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.386153  n/a   
 
 
-
 
NC_009483  Gura_2387  two component, sigma-54 specific, Fis family transcriptional regulator  29.84 
 
 
510 aa  54.7  0.0000005  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3169  two component, sigma54 specific, transcriptional regulator, Fis family  36.05 
 
 
444 aa  53.9  0.0000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.254755  normal  0.187976 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  31.96 
 
 
462 aa  53.9  0.0000006  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_013440  Hoch_6827  response regulator receiver protein  37.74 
 
 
389 aa  54.3  0.0000006  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7223  response regulator receiver modulated metal dependent phosphohydrolase  34.09 
 
 
473 aa  54.3  0.0000006  Burkholderia sp. 383  Bacteria  normal  0.58817  normal  0.218696 
 
 
-
 
NC_007651  BTH_I0615  response regulator  34.15 
 
 
484 aa  54.3  0.0000006  Burkholderia thailandensis E264  Bacteria  normal  0.177724  n/a   
 
 
-
 
NC_011901  Tgr7_3262  nitrogen metabolism transcriptional regulator, NtrC, Fis Family  38.55 
 
 
471 aa  54.3  0.0000006  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0821  response regulator receiver modulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase  28.83 
 
 
1139 aa  54.3  0.0000006  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.187038 
 
 
-
 
NC_007519  Dde_1522  histidine kinase  28.8 
 
 
544 aa  53.9  0.0000007  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0029  two component, sigma54 specific, transcriptional regulator, Fis family  33.96 
 
 
455 aa  53.9  0.0000007  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.59486  normal  0.125276 
 
 
-
 
NC_011761  AFE_0027  sigma-54 dependent transcriptional regulator/response regulator  33.96 
 
 
455 aa  53.9  0.0000007  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_18020  sigma54-dependent response regulator of C4 dicarboxylate transport, two component; DctD  36.14 
 
 
446 aa  53.9  0.0000007  Azotobacter vinelandii DJ  Bacteria  normal  0.266513  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  35.51 
 
 
151 aa  53.9  0.0000007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
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