| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_1800 |
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| Symbol | |
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| ID | 6461944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 1907630 |
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| End bp | 1909024 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642728015 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
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| Protein accession | YP_002018649 |
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| Protein GI | 194336855 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.458412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAATA ATTACATTAG TCAGATAAAG GTACTAATAC TTGACGATGA AATAGATTTT
ACAAATGAGA TCAGTGATTA CCTGAAAAAC ACTGGTTTTA TTCCTTTTTC TGCAAACACG
CCAGAAGAAG GTTATGCTAT TTTGAGCAAA TATAATATTG ATCTTCTCAT TCTTGATGTA
CGTTTGCCAG GTACAAACGG ACTTGATATT TTAAAAAATG TCAAATCGTT GTATCCTGGT
ATCGAAGTGA TCATGGTATC TGCACATGGT GACATGGATA CGGTAATCGA CTCCATAAGG
CTGGGGGCTT TTGATTATTT ACGTAAACCC ATGAGGTATA TAGATATACA GATAGCTATA
GAGCGAACAC AAAAATATCT TAAAATGCAG CGTAACCTCG CGCATGCAGA AGAGAAGTAC
TCACTGATAA CATCAGATAT TGCTTCAAAA ATAGGACGCC ATTGTATCGG AAAAAGCAAA
CAGATAATTG AAATCTACGA ACTGGCTAAA ACAGCATCAG AATATTCAGA TATAAATGTA
CTTATTACGG GCGAAAGTGG AACAGGAAAA GAGATTTTTG CTAAACTTAT TCATTATATG
AGCAAGCAAA AGGACAATTA TTTTGGAGCT ATTAATTGCA GTGCGATAAG TGACGCTTTG
ATTGAAAGTG AATTTTTCGG ACATAAAAAA GGAGCTTTCA CTGGTGCTAT TTCAGATAAA
AAAGGATTAT TTGAAATATG CAATGAGGGG ACATTATTTC TGGATGAAAT TGCTGATATG
CCATTGAATT TGCAGTCAAA GATTTTACGG GCTATTGAGG AAAAAACAAT TACCAGAGTC
GGAGATACAA AACAAATACA AACAAAATTC AGACTGATAG CCGCGACAAA TTGTGATTTG
CAAAAAATGG TTGACGAAAA AAAATTCAGA CTTGATTTAC TTCACAGACT CAATACATTA
CATATACATA TTCCGCCTCT TCGTGAAAGG ATAGAAGATA TCGGGCCATT GTTTATCGAT
TTCACAAAAG AGTTCTCTGA AAAAATCAAC AAACCGATAG AATCTATTGG TGATGATGTC
TTTGTCGCTC TTGAAAAATA TAGTTTTCCC GGGAATATAA GAGAATTAAG AAATCTTGCT
GAAAGAGCTA TCATACTTTC TAAAGGGAAT TCACTACAAA TATGTGATTT CCCATTACCT
GTAGTGAACA AAATATCCAA TACAACTGAT AGCAATACTA AAATTGATGA GGAAGATGCT
ATACATAAAA CTCTTGAGGA ATGCGAATAT AATCAGGTAA TGGCAGCAGA GATACTTGGG
ATAAGCAGAT ATGCTTTGAT TAGAAGGATG AGAAAATATA AAATTGATAT CAAAAGAAAT
GAAGCAGAGC GATAA
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| Protein sequence | MQNNYISQIK VLILDDEIDF TNEISDYLKN TGFIPFSANT PEEGYAILSK YNIDLLILDV
RLPGTNGLDI LKNVKSLYPG IEVIMVSAHG DMDTVIDSIR LGAFDYLRKP MRYIDIQIAI
ERTQKYLKMQ RNLAHAEEKY SLITSDIASK IGRHCIGKSK QIIEIYELAK TASEYSDINV
LITGESGTGK EIFAKLIHYM SKQKDNYFGA INCSAISDAL IESEFFGHKK GAFTGAISDK
KGLFEICNEG TLFLDEIADM PLNLQSKILR AIEEKTITRV GDTKQIQTKF RLIAATNCDL
QKMVDEKKFR LDLLHRLNTL HIHIPPLRER IEDIGPLFID FTKEFSEKIN KPIESIGDDV
FVALEKYSFP GNIRELRNLA ERAIILSKGN SLQICDFPLP VVNKISNTTD SNTKIDEEDA
IHKTLEECEY NQVMAAEILG ISRYALIRRM RKYKIDIKRN EAER
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