More than 300 homologs were found in PanDaTox collection
for query gene Daro_1804 on replicon NC_007298
Organism: Dechloromonas aromatica RCB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007298  Daro_1804  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
469 aa  941    Dechloromonas aromatica RCB  Bacteria  normal  0.0358984  normal  0.379225 
 
 
-
 
NC_012791  Vapar_0965  putative two component, sigma54 specific, transcriptional regulator, Fis family  70.77 
 
 
462 aa  653    Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2786  two component, sigma54 specific, Fis family transcriptional regulator  69.26 
 
 
477 aa  645    Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_1117  two component, sigma54 specific, Fis family transcriptional regulator  70.39 
 
 
466 aa  651    Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0872  two component, sigma54 specific, Fis family transcriptional regulator  67.23 
 
 
471 aa  642    Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0650247 
 
 
-
 
NC_008781  Pnap_3376  two component, sigma54 specific, Fis family transcriptional regulator  69.33 
 
 
462 aa  635    Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.193945  normal 
 
 
-
 
NC_011662  Tmz1t_1222  putative two component, sigma54 specific, transcriptional regulator, Fis family  69.95 
 
 
475 aa  597  1e-169  Thauera sp. MZ1T  Bacteria  normal  0.20015  n/a   
 
 
-
 
NC_007947  Mfla_0911  two component, sigma54 specific, Fis family transcriptional regulator  60.09 
 
 
456 aa  563  1.0000000000000001e-159  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007947  Mfla_1055  two component, sigma54 specific, Fis family transcriptional regulator  60.09 
 
 
456 aa  563  1.0000000000000001e-159  Methylobacillus flagellatus KT  Bacteria  normal  0.523432  normal 
 
 
-
 
NC_007963  Csal_0717  two component, sigma54 specific, Fis family transcriptional regulator  58.81 
 
 
466 aa  533  1e-150  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_2494  response regulator receiver protein  59.83 
 
 
452 aa  531  1e-150  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A1161  two component, sigma54 specific, Fis family transcriptional regulator  59.15 
 
 
453 aa  517  1.0000000000000001e-145  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A2804  transcriptional regulatory protein ZraR  56.22 
 
 
445 aa  508  1e-143  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A2938  transcriptional regulator ZraR  56.22 
 
 
445 aa  509  1e-143  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C2825  transcriptional regulator ZraR  56.22 
 
 
445 aa  509  1e-143  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.479389  normal 
 
 
-
 
NC_011080  SNSL254_A2763  transcriptional regulator ZraR  56.22 
 
 
445 aa  509  1e-143  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_0498  two component response regulator  58.64 
 
 
451 aa  508  9.999999999999999e-143  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_3651  two component, sigma54 specific, Fis family transcriptional regulator  56.44 
 
 
445 aa  506  9.999999999999999e-143  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011149  SeAg_B2721  sigma-54 dependent transcriptional regulator/response regulator  56 
 
 
445 aa  506  9.999999999999999e-143  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3049  putative two component, sigma54 specific, transcriptional regulator, Fis family  56.89 
 
 
445 aa  504  1e-141  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1259  two component, sigma54 specific, Fis family transcriptional regulator  56.22 
 
 
445 aa  504  1e-141  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1152  sigma-54 dependent DNA-binding response regulator  56.22 
 
 
445 aa  504  1e-141  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_2771  two component Fis family transcriptional regulator  60.49 
 
 
449 aa  503  1e-141  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.195731 
 
 
-
 
NC_010159  YpAngola_A3629  two-component system response regulator  56.22 
 
 
445 aa  504  1e-141  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_1226  putative two component, sigma54 specific, transcriptional regulator, Fis family  56.44 
 
 
445 aa  502  1e-141  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1713  sigma-54 dependent DNA-binding response regulator  56.63 
 
 
460 aa  500  1e-140  Methylococcus capsulatus str. Bath  Bacteria  normal  0.91858  n/a   
 
 
-
 
NC_012880  Dd703_2768  putative two component, sigma54 specific, transcriptional regulator, Fis family  56.22 
 
 
445 aa  501  1e-140  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1085  putative two component, sigma54 specific, transcriptional regulator, Fis family  56.22 
 
 
445 aa  499  1e-140  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4272  sigma-54 dependent response regulator  53.3 
 
 
457 aa  494  9.999999999999999e-139  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_0785  Fis family two component transcriptional regulator  55.66 
 
 
456 aa  494  9.999999999999999e-139  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_1340  two component, sigma54 specific, Fis family transcriptional regulator  55.85 
 
 
457 aa  492  9.999999999999999e-139  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3039  two component, sigma54 specific, Fis family transcriptional regulator  54.89 
 
 
445 aa  493  9.999999999999999e-139  Enterobacter sp. 638  Bacteria  normal  0.992832  normal  0.337936 
 
 
-
 
NC_011206  Lferr_2568  two component, sigma54 specific, transcriptional regulator, Fis family  56.25 
 
 
457 aa  488  1e-137  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.0491002  normal 
 
 
-
 
NC_011761  AFE_2955  sigma-54 dependent DNA-binding response regulator, putative  56.25 
 
 
457 aa  488  1e-137  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_2839  sigma-54 dependent response regulator  55.56 
 
 
444 aa  486  1e-136  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2707  sigma-54 dependent response regulator  55.56 
 
 
444 aa  486  1e-136  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2707  sigma-54 dependent response regulator  55.56 
 
 
444 aa  486  1e-136  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02446  predicted DNA-binding response regulator in two-component system  55.33 
 
 
444 aa  484  1e-135  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1114  putative two component, sigma54 specific, transcriptional regulator, Fis family  55.33 
 
 
444 aa  484  1e-135  Escherichia coli DH1  Bacteria  normal  0.922386  n/a   
 
 
-
 
NC_011353  ECH74115_3788  sigma-54 dependent response regulator  55.33 
 
 
444 aa  484  1e-135  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_010468  EcolC_1123  two component, sigma54 specific, Fis family transcriptional regulator  55.33 
 
 
444 aa  484  1e-135  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_02410  hypothetical protein  55.33 
 
 
444 aa  484  1e-135  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E2919  sigma-54 dependent response regulator  55.33 
 
 
444 aa  484  1e-135  Shigella boydii CDC 3083-94  Bacteria  normal  0.70731  n/a   
 
 
-
 
NC_008228  Patl_1603  two component, sigma54 specific, Fis family transcriptional regulator  52.49 
 
 
449 aa  479  1e-134  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_01723  two-component system response regulator  54.89 
 
 
446 aa  479  1e-134  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2187  two component, sigma54 specific, Fis family transcriptional regulator  50.85 
 
 
456 aa  478  1e-133  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011761  AFE_0447  sigma-54 dependent DNA-binding response regulator  49.22 
 
 
461 aa  413  1e-114  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0608  two component, sigma54 specific, transcriptional regulator, Fis family  49.22 
 
 
461 aa  413  1e-114  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2292  two component, sigma54 specific, Fis family transcriptional regulator  44.64 
 
 
462 aa  383  1e-105  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1428  two component, sigma-54 specific, Fis family transcriptional regulator  42.89 
 
 
460 aa  362  6e-99  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0198  two component, sigma54 specific, transcriptional regulator, Fis family  39.69 
 
 
461 aa  356  5e-97  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  40.83 
 
 
461 aa  353  2.9999999999999997e-96  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  41.39 
 
 
461 aa  352  7e-96  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0963  sigma-54 dependent DNA-binding response regulator  41.63 
 
 
467 aa  351  1e-95  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  42.83 
 
 
454 aa  352  1e-95  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  41.45 
 
 
461 aa  350  2e-95  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_007517  Gmet_0702  two component, sigma54 specific, Fis family transcriptional regulator  41.81 
 
 
460 aa  350  4e-95  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  41.45 
 
 
461 aa  349  7e-95  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  41.45 
 
 
461 aa  349  7e-95  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  41.45 
 
 
461 aa  349  7e-95  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  41.45 
 
 
461 aa  349  7e-95  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  41.23 
 
 
461 aa  347  2e-94  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_010814  Glov_2633  two component, sigma54 specific, transcriptional regulator, Fis family  39.91 
 
 
467 aa  345  1e-93  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_2401  two component, sigma54 specific, Fis family transcriptional regulator  42.73 
 
 
449 aa  344  2e-93  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3555  two component, sigma54 specific, transcriptional regulator, Fis family  41.89 
 
 
489 aa  343  2.9999999999999997e-93  Anaeromyxobacter sp. K  Bacteria  normal  0.369206  n/a   
 
 
-
 
NC_007760  Adeh_3471  two component, sigma54 specific, Fis family transcriptional regulator  41.45 
 
 
489 aa  343  2.9999999999999997e-93  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_4770  two component, sigma54 specific, Fis family transcriptional regulator  45.68 
 
 
446 aa  343  2.9999999999999997e-93  Methylobacterium sp. 4-46  Bacteria  normal  0.133057  normal  0.593625 
 
 
-
 
NC_011891  A2cp1_3623  two component, sigma54 specific, transcriptional regulator, Fis family  41.89 
 
 
489 aa  343  2.9999999999999997e-93  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.568637  n/a   
 
 
-
 
NC_002939  GSU1320  sigma-54 dependent DNA-binding response regulator  42.42 
 
 
460 aa  343  4e-93  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0961  two component, sigma54 specific, Fis family transcriptional regulator  41.69 
 
 
454 aa  343  5e-93  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_2124  two component, sigma54 specific, transcriptional regulator, Fis family  48.18 
 
 
474 aa  341  1e-92  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0345179 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  46.15 
 
 
463 aa  341  1e-92  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_011769  DvMF_2095  two component, sigma54 specific, transcriptional regulator, Fis family  42.49 
 
 
471 aa  340  2e-92  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_2280  two component, sigma54 specific, transcriptional regulator, Fis family  41.56 
 
 
453 aa  337  2.9999999999999997e-91  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.620123 
 
 
-
 
NC_010725  Mpop_3260  two component, sigma54 specific, transcriptional regulator, Fis family  43.72 
 
 
450 aa  337  3.9999999999999995e-91  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  43.25 
 
 
441 aa  336  5.999999999999999e-91  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  43.65 
 
 
441 aa  335  7e-91  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_013173  Dbac_2942  two component, sigma54 specific, transcriptional regulator, Fis family  43.14 
 
 
451 aa  335  1e-90  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  42.79 
 
 
441 aa  334  2e-90  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_010814  Glov_0143  two component, sigma54 specific, transcriptional regulator, Fis family  40.4 
 
 
449 aa  333  3e-90  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2669  two component, sigma54 specific, Fis family transcriptional regulator  44.17 
 
 
439 aa  333  3e-90  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1802  two component, sigma-54 specific, Fis family transcriptional regulator  40.31 
 
 
459 aa  333  3e-90  Geobacter uraniireducens Rf4  Bacteria  normal  0.0135454  n/a   
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  40.66 
 
 
454 aa  333  3e-90  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  43.56 
 
 
441 aa  333  4e-90  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  43.56 
 
 
441 aa  333  6e-90  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  43.56 
 
 
441 aa  332  6e-90  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  43.56 
 
 
441 aa  333  6e-90  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  43.56 
 
 
441 aa  333  6e-90  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  40.67 
 
 
490 aa  332  8e-90  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_008607  Ppro_3647  two component, sigma54 specific, Fis family transcriptional regulator  41.15 
 
 
451 aa  332  8e-90  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  43.36 
 
 
441 aa  332  1e-89  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  42.05 
 
 
456 aa  332  1e-89  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_007760  Adeh_0922  two component, sigma54 specific, Fis family transcriptional regulator  42.42 
 
 
462 aa  332  1e-89  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.554455  n/a   
 
 
-
 
NC_011757  Mchl_3285  two component, sigma54 specific, transcriptional regulator, Fis family  42.64 
 
 
450 aa  331  1e-89  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  43.33 
 
 
441 aa  332  1e-89  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  43.33 
 
 
441 aa  331  2e-89  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
NC_009483  Gura_0085  two component, sigma-54 specific, Fis family transcriptional regulator  45.43 
 
 
452 aa  330  2e-89  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  43.19 
 
 
441 aa  331  2e-89  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  41.11 
 
 
462 aa  330  2e-89  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  43.19 
 
 
441 aa  330  3e-89  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
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