More than 300 homologs were found in PanDaTox collection
for query gene Svir_16650 on replicon NC_013159
Organism: Saccharomonospora viridis DSM 43017



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013159  Svir_16650  permease component of ABC-type sugar transporter  100 
 
 
305 aa  598  1e-170  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.653874  normal 
 
 
-
 
NC_013131  Caci_2171  binding-protein-dependent transport systems inner membrane component  46.25 
 
 
312 aa  256  4e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.623971  normal 
 
 
-
 
NC_014210  Ndas_2364  binding-protein-dependent transport systems inner membrane component  43.79 
 
 
661 aa  203  4e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.824137  normal  0.513217 
 
 
-
 
NC_008699  Noca_1419  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
314 aa  167  2.9999999999999998e-40  Nocardioides sp. JS614  Bacteria  normal  0.906597  n/a   
 
 
-
 
NC_010623  Bphy_4058  binding-protein-dependent transport systems inner membrane component  35.46 
 
 
309 aa  162  6e-39  Burkholderia phymatum STM815  Bacteria  normal  normal  0.801646 
 
 
-
 
NC_007952  Bxe_B0419  ABC sugar transporter, inner membrane subunit  34.01 
 
 
296 aa  159  4e-38  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0699  putative sugar ABC transporter, permease protein  35.71 
 
 
289 aa  159  4e-38  Brucella ovis ATCC 25840  Bacteria  normal  0.383075  n/a   
 
 
-
 
NC_004311  BRA0749  sugar ABC transporter, permease protein, putative  35.71 
 
 
289 aa  159  5e-38  Brucella suis 1330  Bacteria  normal  0.444567  n/a   
 
 
-
 
NC_010676  Bphyt_7207  binding-protein-dependent transport systems inner membrane component  33.67 
 
 
296 aa  158  9e-38  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3896  binding-protein-dependent transport systems inner membrane component  33.96 
 
 
289 aa  151  1e-35  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0438989  n/a   
 
 
-
 
NC_012669  Bcav_1681  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
316 aa  128  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.130846  normal 
 
 
-
 
NC_013595  Sros_9092  trehalose/maltose transport inner membrane protein  29.41 
 
 
326 aa  127  2.0000000000000002e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.309735  normal 
 
 
-
 
NC_013595  Sros_1501  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
304 aa  126  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.707606 
 
 
-
 
NC_014165  Tbis_1088  binding-protein-dependent transporter inner membrane component  33.22 
 
 
288 aa  122  7e-27  Thermobispora bispora DSM 43833  Bacteria  normal  0.616528  hitchhiker  0.00755847 
 
 
-
 
NC_013093  Amir_1844  binding-protein-dependent transport systems inner membrane component  32.17 
 
 
291 aa  122  9e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.476032  n/a   
 
 
-
 
NC_013411  GYMC61_2958  binding-protein-dependent transport systems inner membrane component  32.77 
 
 
435 aa  120  3e-26  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_0396  binding-protein-dependent transport systems inner membrane component  32.5 
 
 
307 aa  120  3e-26  Thermoanaerobacter sp. X514  Bacteria  normal  0.701562  n/a   
 
 
-
 
NC_009921  Franean1_7050  binding-protein-dependent transport systems inner membrane component  31.27 
 
 
330 aa  119  3.9999999999999996e-26  Frankia sp. EAN1pec  Bacteria  normal  0.0817185  normal 
 
 
-
 
NC_009667  Oant_0353  binding-protein-dependent transport systems inner membrane component  29.43 
 
 
317 aa  115  1.0000000000000001e-24  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0740262  n/a   
 
 
-
 
NC_010003  Pmob_0028  binding-protein-dependent transport systems inner membrane component  30.03 
 
 
300 aa  112  6e-24  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000378352  n/a   
 
 
-
 
NC_012034  Athe_2309  binding-protein-dependent transport systems inner membrane component  29.54 
 
 
427 aa  112  8.000000000000001e-24  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00000129291  n/a   
 
 
-
 
NC_011988  Avi_6238  ABC transporter membrane spanning protein (maltose)  29.35 
 
 
294 aa  111  1.0000000000000001e-23  Agrobacterium vitis S4  Bacteria  normal  0.602267  n/a   
 
 
-
 
NC_007963  Csal_0259  binding-protein-dependent transport systems inner membrane component  28.62 
 
 
324 aa  110  2.0000000000000002e-23  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0790  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
293 aa  110  2.0000000000000002e-23  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_4864  binding-protein-dependent transport systems inner membrane component  27.86 
 
 
319 aa  110  2.0000000000000002e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.243677  normal  0.263269 
 
 
-
 
NC_008782  Ajs_0861  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
293 aa  110  2.0000000000000002e-23  Acidovorax sp. JS42  Bacteria  normal  normal  0.533828 
 
 
-
 
NC_013739  Cwoe_0172  binding-protein-dependent transport systems inner membrane component  28.31 
 
 
324 aa  111  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_0295  binding-protein-dependent transport systems inner membrane component  32.46 
 
 
306 aa  110  3e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0472746 
 
 
-
 
NC_009654  Mmwyl1_0024  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
320 aa  109  6e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.227719  normal  0.433481 
 
 
-
 
NC_009718  Fnod_0449  binding-protein-dependent transport systems inner membrane component  28.72 
 
 
295 aa  108  8.000000000000001e-23  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.982578  n/a   
 
 
-
 
NC_011886  Achl_2900  binding-protein-dependent transport systems inner membrane component  29.04 
 
 
295 aa  108  8.000000000000001e-23  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011369  Rleg2_3668  binding-protein-dependent transport systems inner membrane component  26.3 
 
 
299 aa  107  3e-22  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0349  binding-protein-dependent transport systems inner membrane component  30.17 
 
 
305 aa  107  3e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0049  binding-protein-dependent transport systems inner membrane component  28.95 
 
 
295 aa  106  4e-22  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4642  binding-protein-dependent transport systems inner membrane component  27.3 
 
 
294 aa  106  6e-22  Sinorhizobium medicae WSM419  Bacteria  normal  0.288658  normal  0.0756683 
 
 
-
 
NC_010003  Pmob_0288  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
290 aa  105  8e-22  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00066862  n/a   
 
 
-
 
NC_008541  Arth_3686  binding-protein-dependent transport systems inner membrane component  31.14 
 
 
310 aa  105  8e-22  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3145  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
303 aa  105  9e-22  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.236219 
 
 
-
 
NC_011366  Rleg2_5851  binding-protein-dependent transport systems inner membrane component  30.86 
 
 
311 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.421015  normal 
 
 
-
 
NC_012858  Rleg_6633  binding-protein-dependent transport systems inner membrane component  27.17 
 
 
294 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.61386 
 
 
-
 
NC_011366  Rleg2_5689  binding-protein-dependent transport systems inner membrane component  27.17 
 
 
294 aa  105  1e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1265  SN-glycerol-3-phosphate transmembrane ABC transporter protein  29.82 
 
 
293 aa  104  2e-21  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3529  binding-protein-dependent transport systems inner membrane component  29.14 
 
 
311 aa  104  2e-21  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0073  binding-protein-dependent transport systems inner membrane component  28.99 
 
 
294 aa  104  2e-21  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00790  binding-protein-dependent transport systems inner membrane component  30.34 
 
 
262 aa  103  2e-21  Halothermothrix orenii H 168  Bacteria  normal  0.772214  n/a   
 
 
-
 
NC_008699  Noca_0870  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
309 aa  104  2e-21  Nocardioides sp. JS614  Bacteria  normal  0.800905  n/a   
 
 
-
 
NC_011368  Rleg2_4759  binding-protein-dependent transport systems inner membrane component  30.18 
 
 
305 aa  104  2e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.536489  normal 
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
294 aa  102  9e-21  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_009620  Smed_3811  binding-protein-dependent transport systems inner membrane component  27.27 
 
 
328 aa  101  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_0187  binding-protein-dependent transport systems inner membrane component  29.51 
 
 
307 aa  101  1e-20  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1093  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
293 aa  100  2e-20  Ralstonia pickettii 12J  Bacteria  normal  0.0106698  normal 
 
 
-
 
NC_007802  Jann_3554  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
311 aa  101  2e-20  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_010483  TRQ2_0971  binding-protein-dependent transport systems inner membrane component  28.11 
 
 
293 aa  101  2e-20  Thermotoga sp. RQ2  Bacteria  normal  0.0994152  n/a   
 
 
-
 
NC_009668  Oant_2941  binding-protein-dependent transport systems inner membrane component  26.6 
 
 
320 aa  101  2e-20  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.974377  n/a   
 
 
-
 
NC_008687  Pden_4441  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
320 aa  100  2e-20  Paracoccus denitrificans PD1222  Bacteria  normal  0.0272526  normal 
 
 
-
 
NC_009953  Sare_0748  binding-protein-dependent transport systems inner membrane component  31.17 
 
 
337 aa  101  2e-20  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00168888 
 
 
-
 
NC_009486  Tpet_0955  binding-protein-dependent transport systems inner membrane component  28.11 
 
 
293 aa  101  2e-20  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0943  binding-protein-dependent transport systems inner membrane component  27.9 
 
 
312 aa  100  3e-20  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.301949 
 
 
-
 
NC_011729  PCC7424_1896  binding-protein-dependent transport systems inner membrane component  28.51 
 
 
296 aa  100  3e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  1.0543799999999999e-20 
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
292 aa  100  3e-20  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_010524  Lcho_3328  binding-protein-dependent transport systems inner membrane component  28.09 
 
 
304 aa  100  3e-20  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_011368  Rleg2_5492  binding-protein-dependent transport systems inner membrane component  28.72 
 
 
328 aa  100  3e-20  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.511246  normal  0.17987 
 
 
-
 
NC_012856  Rpic12D_1186  binding-protein-dependent transport systems inner membrane component  29.47 
 
 
293 aa  100  3e-20  Ralstonia pickettii 12D  Bacteria  normal  0.0963268  normal 
 
 
-
 
NC_010511  M446_1647  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
294 aa  99.8  5e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.123391 
 
 
-
 
NC_012848  Rleg_5364  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
305 aa  99.8  5e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.402925 
 
 
-
 
NC_014212  Mesil_1016  binding-protein-dependent transport systems inner membrane component  30.45 
 
 
301 aa  99.8  5e-20  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5595  binding-protein-dependent transport systems inner membrane component  29.8 
 
 
297 aa  99.4  6e-20  Delftia acidovorans SPH-1  Bacteria  normal  0.475488  normal  0.36412 
 
 
-
 
NC_008698  Tpen_1056  binding-protein-dependent transport systems inner membrane component  24.75 
 
 
313 aa  99.4  6e-20  Thermofilum pendens Hrk 5  Archaea  normal  0.355645  n/a   
 
 
-
 
NC_009620  Smed_3590  binding-protein-dependent transport systems inner membrane component  26.85 
 
 
301 aa  99.4  6e-20  Sinorhizobium medicae WSM419  Bacteria  normal  0.657903  normal 
 
 
-
 
NC_009832  Spro_2296  binding-protein-dependent transport systems inner membrane component  33.74 
 
 
304 aa  99.4  7e-20  Serratia proteamaculans 568  Bacteria  normal  0.44429  normal 
 
 
-
 
NC_010505  Mrad2831_2891  binding-protein-dependent transport systems inner membrane component  28.21 
 
 
318 aa  99.4  7e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.400754  normal  0.350094 
 
 
-
 
NC_004311  BRA0692  sugar ABC transporter, permease protein, putative  27.27 
 
 
349 aa  99.4  8e-20  Brucella suis 1330  Bacteria  decreased coverage  0.0072223  n/a   
 
 
-
 
NC_010511  M446_0821  binding-protein-dependent transport systems inner membrane component  27.31 
 
 
314 aa  99.4  8e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5073  binding-protein-dependent transport systems inner membrane component  31.98 
 
 
330 aa  99  8e-20  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0647  putative sugar ABC transporter, permease protein  27.27 
 
 
349 aa  99.4  8e-20  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_02940  carbohydrate ABC transporter membrane protein  26.21 
 
 
318 aa  98.6  1e-19  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3816  binding-protein-dependent transport systems inner membrane component  27.96 
 
 
293 aa  98.6  1e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0253995  n/a   
 
 
-
 
NC_008148  Rxyl_1990  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
306 aa  98.6  1e-19  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.306567  n/a   
 
 
-
 
NC_008752  Aave_3651  binding-protein-dependent transport systems inner membrane component  28.52 
 
 
301 aa  98.6  1e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  0.0332234  normal 
 
 
-
 
NC_009484  Acry_3002  binding-protein-dependent transport systems inner membrane component  27.15 
 
 
292 aa  98.2  1e-19  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0204  binding-protein-dependent transport systems inner membrane component  29.82 
 
 
299 aa  97.8  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.497209  normal  0.169553 
 
 
-
 
NC_012848  Rleg_5336  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
310 aa  98.2  2e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.369054 
 
 
-
 
NC_009664  Krad_4401  binding-protein-dependent transport systems inner membrane component  29.63 
 
 
316 aa  97.8  2e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1414  binding-protein-dependent transport systems inner membrane component  26.71 
 
 
314 aa  97.8  2e-19  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0491  binding-protein-dependent transport systems inner membrane component  30.71 
 
 
312 aa  97.4  2e-19  Burkholderia phymatum STM815  Bacteria  hitchhiker  0.00343204  hitchhiker  0.00192214 
 
 
-
 
NC_010483  TRQ2_1695  binding-protein-dependent transport systems inner membrane component  28.57 
 
 
288 aa  98.2  2e-19  Thermotoga sp. RQ2  Bacteria  normal  0.967188  n/a   
 
 
-
 
NC_007948  Bpro_0856  binding-protein-dependent transport systems inner membrane component  28.08 
 
 
293 aa  97.1  3e-19  Polaromonas sp. JS666  Bacteria  normal  normal  0.565462 
 
 
-
 
NC_007958  RPD_3321  binding-protein-dependent transport systems inner membrane component  27.52 
 
 
317 aa  97.4  3e-19  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5641  normal 
 
 
-
 
NC_007494  RSP_3673  ABC sugar transporter, inner membrane subunit  29.19 
 
 
308 aa  96.7  4e-19  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.246744  n/a   
 
 
-
 
NC_012858  Rleg_6764  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
326 aa  96.7  4e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009050  Rsph17029_3408  binding-protein-dependent transport systems inner membrane component  29.19 
 
 
308 aa  96.7  4e-19  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.166359  normal  0.855546 
 
 
-
 
NC_011366  Rleg2_5714  binding-protein-dependent transport systems inner membrane component  29.44 
 
 
310 aa  96.7  4e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.568061 
 
 
-
 
NC_007802  Jann_2117  binding-protein-dependent transport systems inner membrane component  26.13 
 
 
365 aa  96.7  5e-19  Jannaschia sp. CCS1  Bacteria  normal  0.482665  normal  0.47011 
 
 
-
 
NC_009664  Krad_4016  binding-protein-dependent transport systems inner membrane component  30.7 
 
 
338 aa  96.7  5e-19  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0789775 
 
 
-
 
NC_012669  Bcav_1096  binding-protein-dependent transport systems inner membrane component  25.53 
 
 
315 aa  96.3  6e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.175054  normal 
 
 
-
 
NC_008786  Veis_1880  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
286 aa  96.3  6e-19  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.262739  normal  0.333569 
 
 
-
 
NC_009504  BOV_A0280  sugar ABC transporter, permease protein  27.31 
 
 
325 aa  96.3  6e-19  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2143  transmembrane ABC transporter protein  28.48 
 
 
317 aa  95.9  7e-19  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00783328  normal 
 
 
-
 
NC_004311  BRA0305  sugar ABC transporter, permease protein  27.31 
 
 
325 aa  95.9  7e-19  Brucella suis 1330  Bacteria  normal  0.0474821  n/a   
 
 
-
 
NC_013595  Sros_2193  binding-protein-dependent transport systems inner membrane component  29.72 
 
 
337 aa  95.9  8e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
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