Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5595 |
Symbol | |
ID | 5751215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6221684 |
End bp | 6222577 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641300728 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001566609 |
Protein GI | 160901027 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.475488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.36412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGGCCG ATAGGACTCC CGAAAGGGCG GCGTCCGCCA GGCGCCTGCT GCCCCGCGCC CTGATGGCGC CCGCCGTGGC CGTGCTGCTG TGCTGGATGC TCGTGCCCTT GTTGATGACG ATTTATTTCT CGCTCGTCAA CTACAACCTC ATGCAGCCAG GCGAGCACCG CTTCGCCGGC TGGGACAACT ACGCCTTCTT CATCACCGAT CCGGACTTCC TGCCCGCCGT GTGGAACACG CTGAACTTCC TGGCCAGCGT GGTGCTGATC ACCCTGGTGC TGGGCGTGCT GATCGCTTTG CTGATCAACG AGCCGTTTCC GGGGCGTGGC GTCGTGCGGG TGCTGCTGAT CTCGCCGTTC TTCGTGATGC CCACGGTCAA TGCGCTGCTG TGGAAACACA TGATGATGAA CCCGATCTAT GGCGTGCTGG CCAGCCTGTG GAGGGCCGTC GGACTGCAGC CCGTGGACTG GCTCACCGAG ATGCCGCTGC TGTCCGTCAT CGTCATGGTG TCCTGGCAAT GGCTGCCCTT CGCCTGCCTG ATCTTCATCA CCTCGCTGCA GTCGCTGGAC CGCGAGCAGA TGGAGGCGGC GCGCATGGAT GGGGCCAACG CCCTGCAGCG CTTTTACTAC CTCACGCTGC CCCATCTGGC GCGGCCCATG GCGGTGGTGG TGATGATCGA GATGATCTTC CTGCTCAGCG TGTTCGCCGA GATCGCCATC ACCACGGCGG GCGGGCCCGG CAACGAGAGC ACCAACCTGA CCTACCTGAT CTACAAGCAG TCGCTGATGA ACTTCGACGT GGGCGTGGCC TCGGCCGGTG CACTGTTTGC CGTGGTGCTG GCCAACATCG TCTCCCTCTT CCTGATCCGC ATCGTCGGCA AGAGCCTGGA CTGA
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Protein sequence | MRADRTPERA ASARRLLPRA LMAPAVAVLL CWMLVPLLMT IYFSLVNYNL MQPGEHRFAG WDNYAFFITD PDFLPAVWNT LNFLASVVLI TLVLGVLIAL LINEPFPGRG VVRVLLISPF FVMPTVNALL WKHMMMNPIY GVLASLWRAV GLQPVDWLTE MPLLSVIVMV SWQWLPFACL IFITSLQSLD REQMEAARMD GANALQRFYY LTLPHLARPM AVVVMIEMIF LLSVFAEIAI TTAGGPGNES TNLTYLIYKQ SLMNFDVGVA SAGALFAVVL ANIVSLFLIR IVGKSLD
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