Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2143 |
Symbol | |
ID | 1220985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2325503 |
End bp | 2326456 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637238539 |
Product | transmembrane ABC transporter protein |
Protein accession | NP_520264 |
Protein GI | 17546862 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00783328 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCCCGA CCATGCGTCA CTTGCATCTT TCCTTTAGCC ACACGACGGC GGTCGGCAAG CCGGCATCGC CGTCCGCGCC ACGGCGGCGC GACGGCGCGA GCTGGCTCGT GTCGCCGTCC GTCGCGGCGC TGCTGCTGTG GATGTCGATC CCGCTCGCGA TGACGATCTG GTTTTCGTTC TCGCGATACA ACCTGCTGAA TCCGGACGTC AAGGGTTTCG CCGGATTCGA CAACTACCAT TTCCTGGCGA CGGATCCGTC GTTCGGCCCA GCCATCTGGC ACACGCTCGC GTTGATCGGC GCGGTGCTGG TGATCACCGT GGTCGGCGGC GTGCTGACGG CGGTGCTGTT CGATCGCAAG TTCTACGGGC AGGGCATCGC GCGTTTGCTC ATGATCGCGC CGTTCTTCGT GATGCCGACG GTGTCCGCGC TGATCTGGAA GAACATGATC CTGCATCCGG TATACGGGCT CGTCGCGAGC GCGATGCGCG CGGTCGGGCT GACACCGATC GACTGGTTCG CCGATTATCC GCTGACCGCT GTCGTGATCA TTGTCGCGTG GCAGTGGTTG CCGTTCGCGT TCCTGATCCT GTTCACCGCG ATCCAGTCGC TCGACCAGGA GCAGAAGGAA GCGGCGCGCA TCGATGGCGC CGGGCCGATC GCGATGTTCT TCTACATCAC GCTGCCGCAT CTGAAGCGCG CGATCGCGGT CGTGGTGATG ATGGAGACGA TCTTCCTGCT GTCGATCTTC GCGGAGATCT ACACGACCAC GGGCGGTGGC CCCGGCAACG CGACGACCAA CCTGTCGTAT CTGATCTATG CGCTCGGCCT GCAGCAGTTC GACGTCGGGC TCGCCTCGGC GGGCGGGATC CTGGCTGTCG TGGTCGCGAA CATCGTGTCG TTCTTCCTGG TGCGGATGCT CGCGAAGAAC CTGAAAGGGG AGTACCAGCA ATGA
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Protein sequence | MVPTMRHLHL SFSHTTAVGK PASPSAPRRR DGASWLVSPS VAALLLWMSI PLAMTIWFSF SRYNLLNPDV KGFAGFDNYH FLATDPSFGP AIWHTLALIG AVLVITVVGG VLTAVLFDRK FYGQGIARLL MIAPFFVMPT VSALIWKNMI LHPVYGLVAS AMRAVGLTPI DWFADYPLTA VVIIVAWQWL PFAFLILFTA IQSLDQEQKE AARIDGAGPI AMFFYITLPH LKRAIAVVVM METIFLLSIF AEIYTTTGGG PGNATTNLSY LIYALGLQQF DVGLASAGGI LAVVVANIVS FFLVRMLAKN LKGEYQQ
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