Gene Bphyt_7207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_7207 
Symbol 
ID6278589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp3593219 
End bp3594109 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content60% 
IMG OID642618227 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001890863 
Protein GI187921831 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCT CCGCTTCTTC GCGCCTGCAA GCGCCCTGGT TGCTGATTGC GCCGAGTCTG 
GTACTGGCGC TTTTCATCAT CAGCTATCCG ATTTTCAACA TCGTGTGGCA ATCGCTGCAC
GAGGTCTCGC GCTTCGGCGC GATTCGCGAC TTCACTGGTC TGCAGAATTT CTACACGATC
TTCAGCGACC CCGCGTTTCT TGCCGCCGCC CGGCGGACCC TTGTCTGGAC TATTTGCGTG
GTGGGCGGCA CGGTGCTGAT CTCGGTGCCC GTTGCGCTGG TGCTCAACCA GGATTTCTAT
GGACGCGGTG TGGCGCGCAC GATCGTCATG TTGCCGTGGT CCGTCTCGCT GACCATGACC
GCCGTGGTCT GGCGCTGGGC CTTCAACGAC GACTACGGCA TGGTCAACGT CACGTTGCAG
CGGCTCGGCC TGATCAGCGG CCCGATTCAT TGGCTGGCCA CACCGGAGCT CGCGTTTCCC
GTCGAAATCG CAGTCGGCAT TCTGGTGTCG GTTCCATTTA CGGTGACGAT TCTGCTAGGC
GGTTTGTCCT CGGTGCCCGG CGATATTTAC GAAGCCGCAC GCATGGACGG CGCAAGCGCC
TGGCAGCAAT TTCGCAAACT CACCATGCCG CTGTTACGGC CGTTCATCAA CATGACGATT
CTGTTGAACG TGATCTATGT GTTCAACTCG TTTCCGATCA TCTGGGTGAT GACGCAGGGC
GGCCCCGACA ACAGCACGCA CATTCTCGTC ACGTATCTTT ATGAGCTCGG CTTCCGGCTC
GGGCGTCCCG GCGAAGCCGC GGCGGTGTCG CTGATCATGC TCGTCATGCT GTTCATTTTC
TCGATCGCCT ATCTGCGCCT GCAGCCCGCG AAAGAAGGAG ATCCGTCATG A
 
Protein sequence
MSRSASSRLQ APWLLIAPSL VLALFIISYP IFNIVWQSLH EVSRFGAIRD FTGLQNFYTI 
FSDPAFLAAA RRTLVWTICV VGGTVLISVP VALVLNQDFY GRGVARTIVM LPWSVSLTMT
AVVWRWAFND DYGMVNVTLQ RLGLISGPIH WLATPELAFP VEIAVGILVS VPFTVTILLG
GLSSVPGDIY EAARMDGASA WQQFRKLTMP LLRPFINMTI LLNVIYVFNS FPIIWVMTQG
GPDNSTHILV TYLYELGFRL GRPGEAAAVS LIMLVMLFIF SIAYLRLQPA KEGDPS